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| − | [[Category:reaction]] | + | [[Category:pathway]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.83-RXN 2.4.1.83-RXN] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5704 PWY-5704] == |
| − | * direction: | + | * taxonomic-range: |
| − | ** left-to-right | + | ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] |
| | + | ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090] |
| | + | ** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-4751] |
| | * common-name: | | * common-name: |
| − | ** dolichol phosphate mannose synthase | + | ** urea degradation ii |
| − | ** dolichyl-phosphate beta-d-mannosyltransferase
| + | == Reaction(s) found == |
| − | * ec-number:
| + | * [[UREASE-RXN]] |
| − | ** [http://enzyme.expasy.org/EC/2.4.1.83 ec-2.4.1.83]
| + | == Reaction(s) not found == |
| − | == Reaction formula == | + | All reactions of this pathways are in present |
| − | * 1 [[DOLICHOLP]][c] '''+''' 1 [[GDP-MANNOSE]][c] '''=>''' 1 [[CPD-171]][c] '''+''' 1 [[GDP]][c]
| + | {{#set: taxonomic-range=tax-2|tax-33090|tax-4751}} |
| − | == Gene(s) associated with this reaction ==
| + | {{#set: common-name=urea degradation ii}} |
| − | * Gene: [[SJ09824]] | + | {{#set: nb reaction found=1}} |
| − | ** Category: [[annotation]]
| + | {{#set: completion rate=1.0}} |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| + | {{#set: nb total reaction=1}} |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[SJ17231]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | == Pathway(s) == | |
| − | * [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation initial phase (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
| |
| − | ** '''16''' reactions found over '''19''' reactions in the full pathway
| |
| − | * [[PWY-7921]], protein O-mannosylation I (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7921 PWY-7921]
| |
| − | ** '''2''' reactions found over '''7''' reactions in the full pathway
| |
| − | * [[PWY-7922]], protein O-mannosylation II (mammals, core M1 and core M2): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7922 PWY-7922]
| |
| − | ** '''2''' reactions found over '''5''' reactions in the full pathway
| |
| − | == Reconstruction information ==
| |
| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | == External links ==
| |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21185 21185]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01009 R01009]
| |
| − | * UNIPROT:
| |
| − | ** [http://www.uniprot.org/uniprot/P14020 P14020]
| |
| − | ** [http://www.uniprot.org/uniprot/Q26732 Q26732]
| |
| − | ** [http://www.uniprot.org/uniprot/P54856 P54856]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9TYJ7 Q9TYJ7]
| |
| − | ** [http://www.uniprot.org/uniprot/O14466 O14466]
| |
| − | {{#set: direction=left-to-right}} | |
| − | {{#set: common-name=dolichyl-phosphate beta-d-mannosyltransferase|dolichol phosphate mannose synthase}} | |
| − | {{#set: ec-number=ec-2.4.1.83}} | |
| − | {{#set: nb gene associated=2}} | |
| − | {{#set: nb pathway associated=3}} | |
| − | {{#set: reconstruction category=orthology|annotation}}
| |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| |
| − | {{#set: reconstruction comment=n.a}}
| |
| − | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
| |
