Difference between revisions of "RXN0-748"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN0-748 == * direction: ** left-to-right * common-name: ** 2'-deoxyguanosine 5'-diphosphate:oxidized nrdh glutaredoxin-like protein oxidored...")
(Created page with "Category:reaction == Reaction ISOCHORSYN-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/5.4.4.2 ec-5.4.4.2] == Reaction formula == * 1 CH...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-748 ==
+
== Reaction ISOCHORSYN-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** 2'-deoxyguanosine 5'-diphosphate:oxidized nrdh glutaredoxin-like protein oxidoreductase
 
−
** ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.17.4.1 ec-1.17.4.1]
+
** [http://enzyme.expasy.org/EC/5.4.4.2 ec-5.4.4.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GDP]][c] '''+''' 1 [[Reduced-NrdH-Proteins]][c] '''=>''' 1 [[DGDP]][c] '''+''' 1 [[Oxidized-NrdH-Proteins]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[CHORISMATE]][c] '''<=>''' 1 [[ISOCHORISMATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ22603]]
−
* Gene: [[SJ16809]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ14458]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ03698]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ18284]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ21121]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ17066]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ21120]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03697]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ20794]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7222]], guanosine deoxyribonucleotides de novo biosynthesis II:
+
* [[PWY-6406]], salicylate biosynthesis I:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5837]], 2-carboxy-1,4-naphthoquinol biosynthesis:
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5901]], 2,3-dihydroxybenzoate biosynthesis:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
+
* RHEA:
−
{{#set: common-name=ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor|2'-deoxyguanosine 5'-diphosphate:oxidized nrdh glutaredoxin-like protein oxidoreductase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18988 18988]
−
{{#set: ec-number=ec-1.17.4.1}}
+
* LIGAND-RXN:
−
{{#set: nb gene associated=9}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01717 R01717]
−
{{#set: nb pathway associated=1}}
+
* UNIPROT:
−
{{#set: reconstruction category=annotation|orthology}}
+
** [http://www.uniprot.org/uniprot/P23973 P23973]
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
** [http://www.uniprot.org/uniprot/P44613 P44613]
 +
** [http://www.uniprot.org/uniprot/P74053 P74053]
 +
** [http://www.uniprot.org/uniprot/P0AEJ2 P0AEJ2]
 +
{{#set: direction=reversible}}
 +
{{#set: ec-number=ec-5.4.4.2}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=3}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:05, 5 January 2021

Reaction ISOCHORSYN-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6406, salicylate biosynthesis I:
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5837, 2-carboxy-1,4-naphthoquinol biosynthesis:
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5901, 2,3-dihydroxybenzoate biosynthesis:
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN0-748&oldid=63757"