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| − | [[Category:reaction]] | + | [[Category:pathway]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINLYA-RXN ARGSUCCINLYA-RXN] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PARATHION-DEGRADATION-PWY PARATHION-DEGRADATION-PWY] == |
| − | * direction: | + | * taxonomic-range: |
| − | ** reversible | + | ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] |
| | * common-name: | | * common-name: |
| − | ** argininosuccinate lyase | + | ** parathion degradation |
| − | * ec-number:
| + | == Reaction(s) found == |
| − | ** [http://enzyme.expasy.org/EC/4.3.2.1 ec-4.3.2.1]
| + | * [[ARYLDIALKYL-PHOSPHATASE-RXN]] |
| − | == Reaction formula == | + | == Reaction(s) not found == |
| − | * 1 [[L-ARGININO-SUCCINATE]][c] '''<=>''' 1 [[ARG]][c] '''+''' 1 [[FUM]][c]
| + | * [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHO-DETHIO-RXN PHOSPHO-DETHIO-RXN] |
| − | == Gene(s) associated with this reaction ==
| + | {{#set: taxonomic-range=tax-2}} |
| − | * Gene: [[SJ20639]] | + | {{#set: common-name=parathion degradation}} |
| − | ** Category: [[annotation]]
| + | {{#set: nb reaction found=1}} |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| + | {{#set: completion rate=0.5}} |
| − | ** Category: [[orthology]]
| + | {{#set: nb total reaction=2}} |
| − | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | == Pathway(s) == | |
| − | * [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYN-PWY ARGSYN-PWY]
| |
| − | ** '''5''' reactions found over '''4''' reactions in the full pathway
| |
| − | * [[PWY-4983]], nitric oxide biosynthesis II (mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4983 PWY-4983]
| |
| − | ** '''3''' reactions found over '''3''' reactions in the full pathway
| |
| − | * [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400]
| |
| − | ** '''7''' reactions found over '''9''' reactions in the full pathway
| |
| − | * [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984] | |
| − | ** '''5''' reactions found over '''5''' reactions in the full pathway
| |
| − | * [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
| |
| − | ** '''9''' reactions found over '''9''' reactions in the full pathway
| |
| − | * [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
| |
| − | ** '''8''' reactions found over '''9''' reactions in the full pathway
| |
| − | == Reconstruction information ==
| |
| − | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
| |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | == External links ==
| |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24023 24023]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01086 R01086]
| |
| − | * UNIPROT:
| |
| − | ** [http://www.uniprot.org/uniprot/P50987 P50987]
| |
| − | ** [http://www.uniprot.org/uniprot/Q46104 Q46104]
| |
| − | ** [http://www.uniprot.org/uniprot/P11447 P11447]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9JVG7 Q9JVG7]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9CJ76 Q9CJ76]
| |
| − | ** [http://www.uniprot.org/uniprot/P44314 P44314]
| |
| − | ** [http://www.uniprot.org/uniprot/Q58201 Q58201]
| |
| − | ** [http://www.uniprot.org/uniprot/P33110 P33110]
| |
| − | ** [http://www.uniprot.org/uniprot/Q01592 Q01592]
| |
| − | ** [http://www.uniprot.org/uniprot/P40369 P40369]
| |
| − | ** [http://www.uniprot.org/uniprot/P50988 P50988]
| |
| − | ** [http://www.uniprot.org/uniprot/P73257 P73257]
| |
| − | ** [http://www.uniprot.org/uniprot/P50514 P50514]
| |
| − | ** [http://www.uniprot.org/uniprot/P04076 P04076]
| |
| − | ** [http://www.uniprot.org/uniprot/P04424 P04424]
| |
| − | ** [http://www.uniprot.org/uniprot/P20673 P20673]
| |
| − | </div>
| |
| − | {{#set: direction=reversible}} | |
| − | {{#set: common-name=argininosuccinate lyase}} | |
| − | {{#set: ec-number=ec-4.3.2.1}}
| |
| − | {{#set: nb gene associated=1}} | |
| − | {{#set: nb pathway associated=6}} | |
| − | {{#set: reconstruction category=orthology|annotation}}
| |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| |
| − | {{#set: reconstruction comment=n.a}}
| |
| − | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} | |
