Difference between revisions of "RXN0-949"

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(Created page with "Category:reaction == Reaction 1.1.1.211-RXN == * direction: ** reversible * common-name: ** long-chain-3-hydroxyacyl-coa dehydrogenase * ec-number: ** [http://enzyme.expas...")
(Created page with "Category:reaction == Reaction RXN0-949 == * direction: ** left-to-right * common-name: ** lipoyl synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.8.1.8 ec-2.8.1.8]...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1.1.1.211-RXN ==
+
== Reaction RXN0-949 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** long-chain-3-hydroxyacyl-coa dehydrogenase
+
** lipoyl synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.211 ec-1.1.1.211]
+
** [http://enzyme.expasy.org/EC/2.8.1.8 ec-2.8.1.8]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Long-Chain-3S-Hydroxyacyl-CoAs]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[Long-Chain-oxoacyl-CoAs]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[Octanoylated-domains]][c] '''+''' 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 2 [[Sulfurated-Sulfur-Acceptors]][c] '''=>''' 2 [[CH33ADO]][c] '''+''' 1 [[Lipoyl-Protein-N6-lipoyllysine]][c] '''+''' 2 [[MET]][c] '''+''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c] '''+''' 2 [[Unsulfurated-Sulfur-Acceptors]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16470]]
+
* Gene: [[SJ03663]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ21390]]
+
* Gene: [[SJ04393]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ11692]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6987]], lipoate biosynthesis and incorporation III (Bacillus):
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY0-1275]], lipoate biosynthesis and incorporation II:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY0-501]], lipoate biosynthesis and incorporation I:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR114885
+
* METANETX-RXN : MNXR123419
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16586 16586]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01778 R01778]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07767 R07767]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q64428 Q64428]
+
{{#set: common-name=lipoyl synthase}}
−
** [http://www.uniprot.org/uniprot/P40939 P40939]
+
{{#set: ec-number=ec-2.8.1.8}}
−
{{#set: direction=reversible}}
+
{{#set: nb gene associated=3}}
−
{{#set: common-name=long-chain-3-hydroxyacyl-coa dehydrogenase}}
+
{{#set: nb pathway associated=3}}
−
{{#set: ec-number=ec-1.1.1.211}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=0}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN0-949

  • direction:
    • left-to-right
  • common-name:
    • lipoyl synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6987, lipoate biosynthesis and incorporation III (Bacillus):
    • 2 reactions found over 3 reactions in the full pathway
  • PWY0-1275, lipoate biosynthesis and incorporation II:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY0-501, lipoate biosynthesis and incorporation I:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123419
  • RHEA:
  • LIGAND-RXN:





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