Difference between revisions of "RXN0-985"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14275 RXN-14275] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:reaction == Reaction RXN0-985 == * direction: ** left-to-right * common-name: ** n3-methylcytosine demethylase * ec-number: ** [http://enzyme.expasy.org/EC/1.14.1...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14275 RXN-14275] ==
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== Reaction RXN0-985 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** n3-methylcytosine demethylase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.1.1.m19 ec-1.1.1.m19]
+
** [http://enzyme.expasy.org/EC/1.14.11.33 ec-1.14.11.33]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-14916]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD0-2106]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
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* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[N3-METHYLCYTOSINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CYTOSINE]][c] '''+''' 1 [[FORMALDEHYDE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ10887]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6920]], 6-gingerol analog biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6920 PWY-6920]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31196 31196]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R04745 R04745]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-1.1.1.m19}}
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{{#set: common-name=n3-methylcytosine demethylase}}
{{#set: nb gene associated=0}}
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{{#set: ec-number=ec-1.14.11.33}}
{{#set: nb pathway associated=1}}
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{{#set: nb gene associated=1}}
{{#set: reconstruction category=gap-filling}}
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{{#set: nb pathway associated=0}}
{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction category=annotation}}
{{#set: reconstruction comment=added for gapfilling}}
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{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
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{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN0-985

  • direction:
    • left-to-right
  • common-name:
    • n3-methylcytosine demethylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links