Difference between revisions of "RXN0-985"

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(Created page with "Category:reaction == Reaction RXN-15133 == * direction: ** left-to-right * common-name: ** lanosterol esterase ** steryl ester hydrolase * ec-number: ** [http://enzyme.exp...")
(Created page with "Category:reaction == Reaction ALGINATE-SYNTHASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.33 ec-2.4.1.33] == Reaction formula...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-15133 ==
+
== Reaction ALGINATE-SYNTHASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** lanosterol esterase
 
** steryl ester hydrolase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.1.1.13 ec-3.1.1.13]
+
** [http://enzyme.expasy.org/EC/2.4.1.33 ec-2.4.1.33]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-16016]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[LANOSTEROL]][c] '''+''' 1 [[OLEATE-CPD]][c] '''+''' 1 [[PROTON]][c]
+
* n [[CPD-1828]][c] '''=>''' n [[GDP]][c] '''+''' n [[PROTON]][c] '''+''' 1 [[Poly-beta-D-Mannuronate]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ13501]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ15522]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7424]], sterol:steryl ester interconversion (yeast):
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* [[PWY-6082]], alginate biosynthesis II (bacterial):
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6073]], alginate biosynthesis I (algal):
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03129 R03129]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=lanosterol esterase|steryl ester hydrolase}}
+
{{#set: ec-number=ec-2.4.1.33}}
{{#set: ec-number=ec-3.1.1.13}}
+
{{#set: nb gene associated=0}}
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=2}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=meneco}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction comment=added for gapfilling}}
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 15:32, 5 January 2021

Reaction ALGINATE-SYNTHASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6082, alginate biosynthesis II (bacterial):
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6073, alginate biosynthesis I (algal):
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links