Difference between revisions of "RXN1A0-6303"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN] == * direction: ** left-...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.31.1-RXN 3.1.31.1-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.o...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.31.1-RXN 3.1.31.1-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** diphosphomevalonate decarboxylase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.33 ec-4.1.1.33]
+
** [http://enzyme.expasy.org/EC/3.1.31.1 ec-3.1.31.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[CPD-641]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[Polynucleotide-Holder]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[3-Prime-Nucleoside-Monophosphates]][c] '''+''' 1 [[3-phosphooligonucleotides]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05356]]
+
* Gene: [[SJ02350]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23733 23733]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01121 R01121]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P32377 P32377]
+
** [http://www.uniprot.org/uniprot/Q9UZT7 Q9UZT7]
−
** [http://www.uniprot.org/uniprot/Q9U2A1 Q9U2A1]
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** [http://www.uniprot.org/uniprot/Q58834 Q58834]
−
** [http://www.uniprot.org/uniprot/Q9U294 Q9U294]
+
** [http://www.uniprot.org/uniprot/O58971 O58971]
−
** [http://www.uniprot.org/uniprot/O13963 O13963]
+
** [http://www.uniprot.org/uniprot/O26594 O26594]
−
** [http://www.uniprot.org/uniprot/Q9M381 Q9M381]
+
** [http://www.uniprot.org/uniprot/Q9PNW0 Q9PNW0]
−
** [http://www.uniprot.org/uniprot/O23722 O23722]
+
** [http://www.uniprot.org/uniprot/P29769 P29769]
 +
** [http://www.uniprot.org/uniprot/P00644 P00644]
 +
** [http://www.uniprot.org/uniprot/P43269 P43269]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=diphosphomevalonate decarboxylase}}
+
{{#set: ec-number=ec-3.1.31.1}}
−
{{#set: ec-number=ec-4.1.1.33}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:28, 26 August 2019

Reaction 3.1.31.1-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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