Difference between revisions of "RXN1A0-6303"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.31.1-RXN 3.1.31.1-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.o...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLYCDEHYDROG-RXN PGLYCDEHYDROG-RXN] == * direction: ** reversible * common-name: ** d-3-phosphogly...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.31.1-RXN 3.1.31.1-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLYCDEHYDROG-RXN PGLYCDEHYDROG-RXN] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** d-3-phosphoglycerate dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.31.1 ec-3.1.31.1]
+
** [http://enzyme.expasy.org/EC/1.1.1.95 ec-1.1.1.95]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Polynucleotide-Holder]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[3-Prime-Nucleoside-Monophosphates]][c] '''+''' 1 [[3-phosphooligonucleotides]][c]
+
* 1 [[G3P]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[3-P-HYDROXYPYRUVATE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02350]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ02143]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13642]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13526]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ09109]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[SERSYN-PWY]], L-serine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12644 12644]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01513 R01513]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9UZT7 Q9UZT7]
+
** [http://www.uniprot.org/uniprot/Q58424 Q58424]
−
** [http://www.uniprot.org/uniprot/Q58834 Q58834]
+
** [http://www.uniprot.org/uniprot/P43885 P43885]
−
** [http://www.uniprot.org/uniprot/O58971 O58971]
+
** [http://www.uniprot.org/uniprot/P35136 P35136]
−
** [http://www.uniprot.org/uniprot/O26594 O26594]
+
** [http://www.uniprot.org/uniprot/Q9PP40 Q9PP40]
−
** [http://www.uniprot.org/uniprot/Q9PNW0 Q9PNW0]
+
** [http://www.uniprot.org/uniprot/P0A9T0 P0A9T0]
−
** [http://www.uniprot.org/uniprot/P29769 P29769]
+
** [http://www.uniprot.org/uniprot/P40510 P40510]
−
** [http://www.uniprot.org/uniprot/P00644 P00644]
+
** [http://www.uniprot.org/uniprot/P40054 P40054]
−
** [http://www.uniprot.org/uniprot/P43269 P43269]
+
** [http://www.uniprot.org/uniprot/O49485 O49485]
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/P87228 P87228]
−
{{#set: ec-number=ec-3.1.31.1}}
+
** [http://www.uniprot.org/uniprot/O04130 O04130]
−
{{#set: nb gene associated=1}}
+
{{#set: direction=reversible}}
−
{{#set: nb pathway associated=0}}
+
{{#set: common-name=d-3-phosphoglycerate dehydrogenase}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: ec-number=ec-1.1.1.95}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: nb gene associated=4}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}

Revision as of 09:31, 27 August 2019

Reaction PGLYCDEHYDROG-RXN

  • direction:
    • reversible
  • common-name:
    • d-3-phosphoglycerate dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • SERSYN-PWY, L-serine biosynthesis I: SERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN1A0-6303&oldid=36986"