Difference between revisions of "RXN1F-10"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTIDPHOS-RXN HISTIDPHOS-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expa...")
(Created page with "Category:reaction == Reaction RXN1F-10 == * direction: ** left-to-right * common-name: ** protochlorophyllide oxidoreductase * ec-number: ** [http://enzyme.expasy.org/EC/1...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTIDPHOS-RXN HISTIDPHOS-RXN] ==
+
== Reaction RXN1F-10 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** protochlorophyllide oxidoreductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.3.15 ec-3.1.3.15]
+
** [http://enzyme.expasy.org/EC/1.3.1.33 ec-1.3.1.33]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-HISTIDINOL-P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[HISTIDINOL]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[Light]][c] '''+''' 1 [[MONO-VINYL-PROTOCHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ12355]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ09091]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR103065
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14466 14466]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11132 11132]
−
* PIR:
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D70002 D70002]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DWEBHB DWEBHB]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DWECHB DWECHB]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E81255 E81255]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F64070 F64070]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S56280 S56280]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03013 R03013]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03845 R03845]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/O34411 O34411]
+
** [http://www.uniprot.org/uniprot/Q3J1A0 Q3J1A0]
−
** [http://www.uniprot.org/uniprot/P10368 P10368]
+
** [http://www.uniprot.org/uniprot/Q02432 Q02432]
−
** [http://www.uniprot.org/uniprot/P06987 P06987]
+
** [http://www.uniprot.org/uniprot/Q9RFD4 Q9RFD4]
−
** [http://www.uniprot.org/uniprot/Q9PM76 Q9PM76]
+
** [http://www.uniprot.org/uniprot/Q9Z5D9 Q9Z5D9]
−
** [http://www.uniprot.org/uniprot/P44327 P44327]
+
** [http://www.uniprot.org/uniprot/Q9RFD6 Q9RFD6]
−
** [http://www.uniprot.org/uniprot/P38635 P38635]
+
** [http://www.uniprot.org/uniprot/O66148 O66148]
 +
** [http://www.uniprot.org/uniprot/Q9ZGE9 Q9ZGE9]
 +
** [http://www.uniprot.org/uniprot/Q9ZGF0 Q9ZGF0]
 +
** [http://www.uniprot.org/uniprot/P21218 P21218]
 +
** [http://www.uniprot.org/uniprot/P41646 P41646]
 +
** [http://www.uniprot.org/uniprot/P56303 P56303]
 +
** [http://www.uniprot.org/uniprot/P56302 P56302]
 +
** [http://www.uniprot.org/uniprot/P48100 P48100]
 +
** [http://www.uniprot.org/uniprot/P48110 P48110]
 +
** [http://www.uniprot.org/uniprot/P48099 P48099]
 +
** [http://www.uniprot.org/uniprot/O48741 O48741]
 +
** [http://www.uniprot.org/uniprot/P73480 P73480]
 +
** [http://www.uniprot.org/uniprot/Q55607 Q55607]
 +
** [http://www.uniprot.org/uniprot/P51278 P51278]
 +
** [http://www.uniprot.org/uniprot/P51188 P51188]
 +
** [http://www.uniprot.org/uniprot/P51187 P51187]
 +
** [http://www.uniprot.org/uniprot/Q39617 Q39617]
 +
** [http://www.uniprot.org/uniprot/P56291 P56291]
 +
** [http://www.uniprot.org/uniprot/Q7M189 Q7M189]
 +
** [http://www.uniprot.org/uniprot/P36208 P36208]
 +
** [http://www.uniprot.org/uniprot/P36437 P36437]
 +
** [http://www.uniprot.org/uniprot/Q41578 Q41578]
 +
** [http://www.uniprot.org/uniprot/Q04607 Q04607]
 +
** [http://www.uniprot.org/uniprot/Q02431 Q02431]
 +
** [http://www.uniprot.org/uniprot/O22597 O22597]
 +
** [http://www.uniprot.org/uniprot/Q00864 Q00864]
 +
** [http://www.uniprot.org/uniprot/P29683 P29683]
 +
** [http://www.uniprot.org/uniprot/P26177 P26177]
 +
** [http://www.uniprot.org/uniprot/P26180 P26180]
 +
** [http://www.uniprot.org/uniprot/P17652 P17652]
 +
** [http://www.uniprot.org/uniprot/P15904 P15904]
 +
** [http://www.uniprot.org/uniprot/P13653 P13653]
 +
** [http://www.uniprot.org/uniprot/P26156 P26156]
 +
** [http://www.uniprot.org/uniprot/P28372 P28372]
 +
** [http://www.uniprot.org/uniprot/Q41249 Q41249]
 +
** [http://www.uniprot.org/uniprot/P26179 P26179]
 +
** [http://www.uniprot.org/uniprot/P26163 P26163]
 +
** [http://www.uniprot.org/uniprot/P26178 P26178]
 +
** [http://www.uniprot.org/uniprot/P26164 P26164]
 +
** [http://www.uniprot.org/uniprot/P26237 P26237]
 +
** [http://www.uniprot.org/uniprot/P26238 P26238]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-3.1.3.15}}
+
{{#set: common-name=protochlorophyllide oxidoreductase}}
−
{{#set: nb gene associated=0}}
+
{{#set: ec-number=ec-1.3.1.33}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=2}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:18, 18 March 2021

Reaction RXN1F-10

  • direction:
    • left-to-right
  • common-name:
    • protochlorophyllide oxidoreductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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