Difference between revisions of "RXN1F-19"

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(Created page with "Category:reaction == Reaction RXN-9227 == * direction: ** left-to-right * common-name: ** 2-heptaprenyl-6-methoxy-1,4-benzoquinone methyltransferase * ec-number: ** [http:...")
(Created page with "Category:reaction == Reaction RXN1F-19 == * direction: ** left-to-right * common-name: ** allene oxide synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.92 ec-4....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-9227 ==
+
== Reaction RXN1F-19 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 2-heptaprenyl-6-methoxy-1,4-benzoquinone methyltransferase
+
** allene oxide synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.201 ec-2.1.1.201]
+
** [http://enzyme.expasy.org/EC/4.2.1.92 ec-4.2.1.92]
−
* synonymous:
 
−
** 2-heptaprenyl-6-methoxy-1,4-benzoquinone methylase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-9858]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-9859]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-725]][c] '''=>''' 1 [[CPD-728]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ07592]]
−
* Gene: [[SJ11757]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ07072]]
+
* Gene: [[SJ03285]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ02842]]
+
* Gene: [[SJ20926]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ00609]]
+
* Gene: [[SJ05390]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ11297]]
+
* Gene: [[SJ05110]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ02693]]
+
* Gene: [[SJ01682]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ20751]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5855]], ubiquinol-7 biosynthesis (prokaryotic):
+
* [[PWY-735]], jasmonic acid biosynthesis:
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
** '''16''' reactions found over '''19''' reactions in the full pathway
−
* [[PWY-5873]], ubiquinol-7 biosynthesis (eukaryotic):
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR139566
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44757 44757]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25075 25075]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07863 R07863]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=2-heptaprenyl-6-methoxy-1,4-benzoquinone methyltransferase}}
+
{{#set: common-name=allene oxide synthase}}
−
{{#set: ec-number=ec-2.1.1.201}}
+
{{#set: ec-number=ec-4.2.1.92}}
−
{{#set: synonymous=2-heptaprenyl-6-methoxy-1,4-benzoquinone methylase}}
+
{{#set: nb gene associated=6}}
−
{{#set: nb gene associated=7}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=2}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction RXN1F-19

  • direction:
    • left-to-right
  • common-name:
    • allene oxide synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-735, jasmonic acid biosynthesis:
    • 16 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR139566
  • RHEA:
  • LIGAND-RXN:





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