Difference between revisions of "RXN1F-20"
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(Created page with "Category:reaction == Reaction 3.2.1.96-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.96 ec-3.2.1.96] == Reaction formula == * 1 [...") |
(Created page with "Category:reaction == Reaction RXN0-5114 == * direction: ** left-to-right * common-name: ** phosphoserine phosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.3 e...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN0-5114 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
| + | * common-name: | ||
| + | ** phosphoserine phosphatase | ||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/3. | + | ** [http://enzyme.expasy.org/EC/3.1.3.3 ec-3.1.3.3] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[3-P-SERINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[SER]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ09777]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[SERSYN-PWY]], L-serine biosynthesis I: | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | |||
== External links == | == External links == | ||
| − | * | + | * RHEA: |
| − | ** [http://www. | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21209 21209] |
| − | + | * LIGAND-RXN: | |
| − | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00582 R00582] | |
| − | * | ||
| − | ** [http://www. | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: ec-number=ec-3. | + | {{#set: common-name=phosphoserine phosphatase}} |
| + | {{#set: ec-number=ec-3.1.3.3}} | ||
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
{{#set: reconstruction category=annotation|orthology}} | {{#set: reconstruction category=annotation|orthology}} | ||
{{#set: reconstruction tool=pathwaytools|pantograph}} | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 19:02, 14 January 2021
Contents
Reaction RXN0-5114
- direction:
- left-to-right
- common-name:
- phosphoserine phosphatase
- ec-number:
Reaction formula
- 1 3-P-SERINE[c] + 1 WATER[c] => 1 Pi[c] + 1 SER[c]
Gene(s) associated with this reaction
- Gene: SJ09777
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- SERSYN-PWY, L-serine biosynthesis I:
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
