Difference between revisions of "RXN1G-1084"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12583 RXN-12583] == * direction: ** left-to-right * common-name: ** pyruvate:thiamin diphosphat...")
(Created page with "Category:reaction == Reaction RXN1G-1084 == * direction: ** left-to-right * common-name: ** cis-delta19-3-hydroxyc38:1-[acyl-carrier protein] dehydratase * ec-number: ** [...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12583 RXN-12583] ==
+
== Reaction RXN1G-1084 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)
+
** cis-delta19-3-hydroxyc38:1-[acyl-carrier protein] dehydratase
−
** pyruvate dehydrogenase (nad+)
+
* ec-number:
 +
** [http://enzyme.expasy.org/EC/4.2.1.m1 ec-4.2.1.m1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[THIAMINE-PYROPHOSPHATE]][c] '''=>''' 1 [[2-ALPHA-HYDROXYETHYL-THPP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[cis-delta19-3-hydroxyC38-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[trans-D2-cis-D19-C38-ACPs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[SJ10275]]
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* Gene: [[SJ00971]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ01042]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ14925]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19470]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ09312]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWYG-321]], mycolate biosynthesis:
 +
** '''26''' reactions found over '''205''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
* METANETX-RXN : MNXR123461
−
** [http://www.genome.jp/dbget-bin/www_bget?R00014 R00014]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=pyruvate dehydrogenase (nad+)|pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)}}
+
{{#set: common-name=cis-delta19-3-hydroxyc38:1-[acyl-carrier protein] dehydratase}}
−
{{#set: nb gene associated=5}}
+
{{#set: ec-number=ec-4.2.1.m1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN1G-1084

  • direction:
    • left-to-right
  • common-name:
    • cis-delta19-3-hydroxyc38:1-[acyl-carrier protein] dehydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWYG-321, mycolate biosynthesis:
    • 26 reactions found over 205 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123461

Property "Common-name" (as page type) with input value "cis-delta19-3-hydroxyc38:1-[acyl-carrier protein] dehydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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