Difference between revisions of "RXN1G-1436"

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(Created page with "Category:reaction == Reaction CARBPSYN-RXN == * direction: ** left-to-right * common-name: ** carbamoyl phosphate synthetase * ec-number: ** [http://enzyme.expasy.org/EC/6...")
(Created page with "Category:reaction == Reaction RXN1G-1436 == * direction: ** left-to-right * common-name: ** 6-o-cis-methoxy-mycolyl-trehalose-6-phosphate phosphohydrolase * ec-number: **...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction CARBPSYN-RXN ==
+
== Reaction RXN1G-1436 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** carbamoyl phosphate synthetase
+
** 6-o-cis-methoxy-mycolyl-trehalose-6-phosphate phosphohydrolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.5.5 ec-6.3.5.5]
+
** [http://enzyme.expasy.org/EC/3.1.3.12 ec-3.1.3.12]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[ATP]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[ADP]][c] '''+''' 1 [[CARBAMOYL-P]][c] '''+''' 1 [[GLT]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[CPD1G-771]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD1G-1345]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17851]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ21324]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13486]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ21183]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08873]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18485]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ17025]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ15949]]
+
* Gene: [[SJ21325]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07303]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18387]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ10128]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7400]], L-arginine biosynthesis IV (archaea):
+
* [[PWYG-321]], mycolate biosynthesis:
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''26''' reactions found over '''205''' reactions in the full pathway
−
* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine):
 
−
** '''5''' reactions found over '''4''' reactions in the full pathway
 
−
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle):
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline):
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5686]], UMP biosynthesis I:
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7790]], UMP biosynthesis II:
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7791]], UMP biosynthesis III:
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR123478
−
* METANETX-RXN : MNXR96485
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18634 18634]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00575 R00575]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P08955 P08955]
 
−
** [http://www.uniprot.org/uniprot/P13258 P13258]
 
−
** [http://www.uniprot.org/uniprot/P38099 P38099]
 
−
** [http://www.uniprot.org/uniprot/P27708 P27708]
 
−
** [http://www.uniprot.org/uniprot/Q91437 Q91437]
 
−
** [http://www.uniprot.org/uniprot/O28994 O28994]
 
−
** [http://www.uniprot.org/uniprot/P57689 P57689]
 
−
** [http://www.uniprot.org/uniprot/P38098 P38098]
 
−
** [http://www.uniprot.org/uniprot/Q9WZ27 Q9WZ27]
 
−
** [http://www.uniprot.org/uniprot/Q9PMG8 Q9PMG8]
 
−
** [http://www.uniprot.org/uniprot/Q9JXW8 Q9JXW8]
 
−
** [http://www.uniprot.org/uniprot/Q9JVZ6 Q9JVZ6]
 
−
** [http://www.uniprot.org/uniprot/P25993 P25993]
 
−
** [http://www.uniprot.org/uniprot/Q9PIL7 Q9PIL7]
 
−
** [http://www.uniprot.org/uniprot/P25994 P25994]
 
−
** [http://www.uniprot.org/uniprot/Q9JW02 Q9JW02]
 
−
** [http://www.uniprot.org/uniprot/O25577 O25577]
 
−
** [http://www.uniprot.org/uniprot/P52557 P52557]
 
−
** [http://www.uniprot.org/uniprot/P46537 P46537]
 
−
** [http://www.uniprot.org/uniprot/P18185 P18185]
 
−
** [http://www.uniprot.org/uniprot/P07259 P07259]
 
−
** [http://www.uniprot.org/uniprot/P20054 P20054]
 
−
** [http://www.uniprot.org/uniprot/P05990 P05990]
 
−
** [http://www.uniprot.org/uniprot/P14845 P14845]
 
−
** [http://www.uniprot.org/uniprot/Q06950 Q06950]
 
−
** [http://www.uniprot.org/uniprot/Q92115 Q92115]
 
−
** [http://www.uniprot.org/uniprot/Q09794 Q09794]
 
−
** [http://www.uniprot.org/uniprot/P03965 P03965]
 
−
** [http://www.uniprot.org/uniprot/P07258 P07258]
 
−
** [http://www.uniprot.org/uniprot/P00968 P00968]
 
−
** [http://www.uniprot.org/uniprot/P0A6F1 P0A6F1]
 
−
** [http://www.uniprot.org/uniprot/P93345 P93345]
 
−
** [http://www.uniprot.org/uniprot/Q27732 Q27732]
 
−
** [http://www.uniprot.org/uniprot/Q27448 Q27448]
 
−
** [http://www.uniprot.org/uniprot/O50236 O50236]
 
−
** [http://www.uniprot.org/uniprot/O94313 O94313]
 
−
** [http://www.uniprot.org/uniprot/Q59968 Q59968]
 
−
** [http://www.uniprot.org/uniprot/Q59969 Q59969]
 
−
** [http://www.uniprot.org/uniprot/O50301 O50301]
 
−
** [http://www.uniprot.org/uniprot/O50302 O50302]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=carbamoyl phosphate synthetase}}
+
{{#set: common-name=6-o-cis-methoxy-mycolyl-trehalose-6-phosphate phosphohydrolase}}
−
{{#set: ec-number=ec-6.3.5.5}}
+
{{#set: ec-number=ec-3.1.3.12}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=10}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN1G-1436

  • direction:
    • left-to-right
  • common-name:
    • 6-o-cis-methoxy-mycolyl-trehalose-6-phosphate phosphohydrolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWYG-321, mycolate biosynthesis:
    • 26 reactions found over 205 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123478





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