Difference between revisions of "RXN1G-2544"

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(Created page with "Category:reaction == Reaction FORMYLTHFDEFORMYL-RXN == * direction: ** left-to-right * common-name: ** formyltetrahydrofolate deformylase * ec-number: ** [http://enzyme.ex...")
(Created page with "Category:reaction == Reaction RXN1G-2544 == * direction: ** left-to-right * common-name: ** cis-cyclopropane-δ19-37-hydroxy-38-methyl-c57:1-[acp] synthase ** cis-met...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction FORMYLTHFDEFORMYL-RXN ==
+
== Reaction RXN1G-2544 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** formyltetrahydrofolate deformylase
+
** cis-cyclopropane-δ19-37-hydroxy-38-methyl-c57:1-[acp] synthase
 +
** cis-methoxy-c59-meroacyl-[acp] synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.1.10 ec-3.5.1.10]
+
** [http://enzyme.expasy.org/EC/2.1.1.79 ec-2.1.1.79]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[THF-GLU-N]][c]
+
* 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[cis-D19-37-MOH-38-Me-C57-1-ACPs]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[cis-19-CP-37-Mex-38-Me-C59-ACPs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15379]]
+
* Gene: [[SJ13641]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7909]], formaldehyde oxidation VII (THF pathway):
+
* [[PWYG-321]], mycolate biosynthesis:
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''26''' reactions found over '''205''' reactions in the full pathway
−
* [[P164-PWY]], purine nucleobases degradation I (anaerobic):
 
−
** '''6''' reactions found over '''17''' reactions in the full pathway
 
−
* [[PWY-5497]], purine nucleobases degradation II (anaerobic):
 
−
** '''10''' reactions found over '''24''' reactions in the full pathway
 
−
* [[PWY-2201]], folate transformations I:
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR123514
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19834 19834]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00944 R00944]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P37051 P37051]
 
−
** [http://www.uniprot.org/uniprot/Q03432 Q03432]
 
−
** [http://www.uniprot.org/uniprot/Q9PPC9 Q9PPC9]
 
−
** [http://www.uniprot.org/uniprot/Q46339 Q46339]
 
−
** [http://www.uniprot.org/uniprot/Q9X7F7 Q9X7F7]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=formyltetrahydrofolate deformylase}}
+
{{#set: common-name=cis-methoxy-c59-meroacyl-[acp] synthase|cis-cyclopropane-δ19-37-hydroxy-38-methyl-c57:1-[acp] synthase}}
−
{{#set: ec-number=ec-3.5.1.10}}
+
{{#set: ec-number=ec-2.1.1.79}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN1G-2544

  • direction:
    • left-to-right
  • common-name:
    • cis-cyclopropane-δ19-37-hydroxy-38-methyl-c57:1-[acp] synthase
    • cis-methoxy-c59-meroacyl-[acp] synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWYG-321, mycolate biosynthesis:
    • 26 reactions found over 205 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123514
  • Property "Common-name" (as page type) with input value "cis-methoxy-c59-meroacyl-[acp] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "cis-cyclopropane-δ19-37-hydroxy-38-methyl-c57:1-[acp] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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