Difference between revisions of "RXN1G-3641"

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(Created page with "Category:reaction == Reaction IMPCYCLOHYDROLASE-RXN == * direction: ** reversible * common-name: ** imp cyclohydrolase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4.1...")
(Created page with "Category:reaction == Reaction RXN1G-3641 == * direction: ** left-to-right * common-name: ** cis-δ21-39-hydroxy-40-methyl-c59:1-[acp] reductase ** cis-keto-c60-meroac...")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction IMPCYCLOHYDROLASE-RXN ==
+
== Reaction RXN1G-3641 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** imp cyclohydrolase
+
** cis-δ21-39-hydroxy-40-methyl-c59:1-[acp] reductase
 +
** cis-keto-c60-meroacyl-[acp] synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.4.10 ec-3.5.4.10]
+
** [http://enzyme.expasy.org/EC/2.1.1.79 ec-2.1.1.79]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[IMP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE]][c]
+
* 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[cis-D21-39-oxo-40-Me-C59-1-ACPs]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[cis-21-CP-39-keto-40-Me-C60-ACPs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21660]]
+
* Gene: [[SJ13641]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II:
+
* [[PWYG-321]], mycolate biosynthesis:
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''26''' reactions found over '''205''' reactions in the full pathway
−
* [[PWY-7234]], inosine-5'-phosphate biosynthesis III:
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6123]], inosine-5'-phosphate biosynthesis I:
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR123552
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18448 18448]
+
{{#set: direction=left-to-right}}
−
* LIGAND-RXN:
+
{{#set: common-name=cis-&delta;21-39-hydroxy-40-methyl-c59:1-[acp] reductase|cis-keto-c60-meroacyl-[acp] synthase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01127 R01127]
+
{{#set: ec-number=ec-2.1.1.79}}
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P43852 P43852]
 
−
** [http://www.uniprot.org/uniprot/P12048 P12048]
 
−
** [http://www.uniprot.org/uniprot/P31335 P31335]
 
−
** [http://www.uniprot.org/uniprot/P26978 P26978]
 
−
** [http://www.uniprot.org/uniprot/P15639 P15639]
 
−
** [http://www.uniprot.org/uniprot/Q9PNY2 Q9PNY2]
 
−
** [http://www.uniprot.org/uniprot/Q9JUQ8 Q9JUQ8]
 
−
** [http://www.uniprot.org/uniprot/P31939 P31939]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=imp cyclohydrolase}}
 
−
{{#set: ec-number=ec-3.5.4.10}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN1G-3641

  • direction:
    • left-to-right
  • common-name:
    • cis-δ21-39-hydroxy-40-methyl-c59:1-[acp] reductase
    • cis-keto-c60-meroacyl-[acp] synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWYG-321, mycolate biosynthesis:
    • 26 reactions found over 205 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123552
  • Property "Common-name" (as page type) with input value "cis-δ21-39-hydroxy-40-methyl-c59:1-[acp] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "cis-keto-c60-meroacyl-[acp] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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