Difference between revisions of "RXN3O-203"

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(Created page with "Category:reaction == Reaction IMPCYCLOHYDROLASE-RXN == * direction: ** reversible * common-name: ** imp cyclohydrolase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4.1...")
(Created page with "Category:reaction == Reaction RXN3O-203 == * direction: ** left-to-right == Reaction formula == * 1 FECOSTEROL[c] '''=>''' 1 EPISTEROL[c] == Gene(s) associated wit...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction IMPCYCLOHYDROLASE-RXN ==
+
== Reaction RXN3O-203 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** imp cyclohydrolase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.5.4.10 ec-3.5.4.10]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[IMP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE]][c]
+
* 1 [[FECOSTEROL]][c] '''=>''' 1 [[EPISTEROL]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21660]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II:
+
* [[PWY-6075]], ergosterol biosynthesis I:
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7234]], inosine-5'-phosphate biosynthesis III:
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6123]], inosine-5'-phosphate biosynthesis I:
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR100783
+
* METANETX-RXN : MNXR96432
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18448 18448]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33436 33436]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01127 R01127]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07497 R07497]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P43852 P43852]
+
{{#set: nb gene associated=0}}
−
** [http://www.uniprot.org/uniprot/P12048 P12048]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/P31335 P31335]
+
{{#set: reconstruction category=gap-filling}}
−
** [http://www.uniprot.org/uniprot/P26978 P26978]
+
{{#set: reconstruction tool=meneco}}
−
** [http://www.uniprot.org/uniprot/P15639 P15639]
+
{{#set: reconstruction comment=added for gapfilling}}
−
** [http://www.uniprot.org/uniprot/Q9PNY2 Q9PNY2]
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
** [http://www.uniprot.org/uniprot/Q9JUQ8 Q9JUQ8]
 
−
** [http://www.uniprot.org/uniprot/P31939 P31939]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=imp cyclohydrolase}}
 
−
{{#set: ec-number=ec-3.5.4.10}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=3}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
 

Latest revision as of 11:23, 18 March 2021

Reaction RXN3O-203

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6075, ergosterol biosynthesis I:
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR96432
  • RHEA:
  • LIGAND-RXN:




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