Difference between revisions of "RXN3O-203"

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(Created page with "Category:reaction == Reaction RXN-9969 == * direction: ** left-to-right * common-name: ** cis-prenyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.87 ec-2....")
(Created page with "Category:reaction == Reaction RXN3O-203 == * direction: ** left-to-right == Reaction formula == * 1 FECOSTEROL[c] '''=>''' 1 EPISTEROL[c] == Gene(s) associated wit...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-9969 ==
+
== Reaction RXN3O-203 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** cis-prenyltransferase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.5.1.87 ec-2.5.1.87]
 
* synonymous:
 
** (2e,6e)-farnesyl diphosphate di-trans,poly-cis-polyprenyl diphosphate synthase
 
 
== Reaction formula ==
 
== Reaction formula ==
* 13 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[FARNESYL-PP]][c] '''=>''' 1 [[CPD-10712]][c] '''+''' 13 [[PPI]][c]
+
* 1 [[FECOSTEROL]][c] '''=>''' 1 [[EPISTEROL]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ18388]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6129]], dolichol and dolichyl phosphate biosynthesis:
+
* [[PWY-6075]], ergosterol biosynthesis I:
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR96432
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33436 33436]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07497 R07497]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=cis-prenyltransferase}}
+
{{#set: nb gene associated=0}}
{{#set: ec-number=ec-2.5.1.87}}
 
{{#set: synonymous=(2e,6e)-farnesyl diphosphate di-trans,poly-cis-polyprenyl diphosphate synthase}}
 
{{#set: nb gene associated=1}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=meneco}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added for gapfilling}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN3O-203

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6075, ergosterol biosynthesis I:
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR96432
  • RHEA:
  • LIGAND-RXN: