Difference between revisions of "RXN3O-203"

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(Created page with "Category:reaction == Reaction BUTYRYL-COA-DEHYDROGENASE-RXN == * direction: ** left-to-right * common-name: ** butanoyl-coa dehydrogenase * ec-number: ** [http://enzyme.ex...")
(Created page with "Category:reaction == Reaction RXN-9969 == * direction: ** left-to-right * common-name: ** cis-prenyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.87 ec-2....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction BUTYRYL-COA-DEHYDROGENASE-RXN ==
+
== Reaction RXN-9969 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** butanoyl-coa dehydrogenase
+
** cis-prenyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.8.1 ec-1.3.8.1]
+
** [http://enzyme.expasy.org/EC/2.5.1.87 ec-2.5.1.87]
 +
* synonymous:
 +
** (2e,6e)-farnesyl diphosphate di-trans,poly-cis-polyprenyl diphosphate synthase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CROTONYL-COA]][c] '''+''' 1 [[ETF-Reduced]][c] '''=>''' 1 [[BUTYRYL-COA]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c]
+
* 13 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[FARNESYL-PP]][c] '''=>''' 1 [[CPD-10712]][c] '''+''' 13 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19669]]
+
* Gene: [[SJ18388]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6583]], pyruvate fermentation to butanol I:
+
* [[PWY-6129]], dolichol and dolichyl phosphate biosynthesis:
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5022]], 4-aminobutanoate degradation V:
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5676]], acetyl-CoA fermentation to butanoate II:
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[P163-PWY]], L-lysine fermentation to acetate and butanoate:
 
−
** '''3''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5677]], succinate fermentation to butanoate:
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[CENTFERM-PWY]], pyruvate fermentation to butanoate:
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate):
 
−
** '''7''' reactions found over '''11''' reactions in the full pathway
 
−
* [[P3-PWY]], gallate degradation III (anaerobic):
 
−
** '''3''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24006 24006]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01178 R01178]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=butanoyl-coa dehydrogenase}}
+
{{#set: common-name=cis-prenyltransferase}}
−
{{#set: ec-number=ec-1.3.8.1}}
+
{{#set: ec-number=ec-2.5.1.87}}
 +
{{#set: synonymous=(2e,6e)-farnesyl diphosphate di-trans,poly-cis-polyprenyl diphosphate synthase}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:36, 5 January 2021

Reaction RXN-9969

  • direction:
    • left-to-right
  • common-name:
    • cis-prenyltransferase
  • ec-number:
  • synonymous:
    • (2e,6e)-farnesyl diphosphate di-trans,poly-cis-polyprenyl diphosphate synthase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6129, dolichol and dolichyl phosphate biosynthesis:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN3O-203&oldid=77381"