Difference between revisions of "RXN3O-5293"

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(Created page with "Category:reaction == Reaction RXN-11921 == * direction: ** left-to-right * common-name: ** 3-methylcrotonyl-coa:acetyl-coa c-acyltransferase * ec-number: ** [http://enzyme...")
(Created page with "Category:reaction == Reaction 1.14.99.33-RXN == * direction: ** left-to-right * common-name: ** delta12-fatty acid dehydrogenase * ec-number: ** [http://enzyme.expasy.org/...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-11921 ==
+
== Reaction 1.14.99.33-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** 3-methylcrotonyl-coa:acetyl-coa c-acyltransferase
+
** delta12-fatty acid dehydrogenase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1]
+
** [http://enzyme.expasy.org/EC/1.14.19.39 ec-1.14.19.39]
* synonymous:
 
** 5-methyl-3-oxo-4-hexenoyl-coa thiolase
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CO-A]][c] '''+''' 1 [[CPD-12906]][c] '''=>''' 1 [[3-METHYL-CROTONYL-COA]][c] '''+''' 1 [[ACETYL-COA]][c]
+
* 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[Linoleoyl-groups]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 1 [[Glycerolipid-crepenynate]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ09371]]
+
* Gene: [[SJ09228]]
** Category: [[orthology]]
+
** Category: [[annotation]]
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
* Gene: [[SJ21818]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6672]], cis-genanyl-CoA degradation:
+
* [[PWY-6013]], crepenynate biosynthesis:
** '''4''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R08095 R08095]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05740 R05740]
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23456 23456]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=3-methylcrotonyl-coa:acetyl-coa c-acyltransferase}}
+
{{#set: common-name=delta12-fatty acid dehydrogenase}}
{{#set: ec-number=ec-2.3.1}}
+
{{#set: ec-number=ec-1.14.19.39}}
{{#set: synonymous=5-methyl-3-oxo-4-hexenoyl-coa thiolase}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:05, 5 January 2021

Reaction 1.14.99.33-RXN

  • direction:
    • left-to-right
  • common-name:
    • delta12-fatty acid dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6013, crepenynate biosynthesis:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links