Difference between revisions of "RXN3O-581"

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(Created page with "Category:reaction == Reaction UGDC == * direction: ** left-to-right * common-name: ** udp-glucuronate decarboxylase == Reaction formula == * 1.0 PROTON[c] '''+''' 1.0...")
(Created page with "Category:reaction == Reaction 4OHBENZOATE-OCTAPRENYLTRANSFER-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.39 ec-2.5.1.39] == Rea...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction UGDC ==
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== Reaction 4OHBENZOATE-OCTAPRENYLTRANSFER-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
+
* ec-number:
** udp-glucuronate decarboxylase
+
** [http://enzyme.expasy.org/EC/2.5.1.39 ec-2.5.1.39]
 
== Reaction formula ==
 
== Reaction formula ==
* 1.0 [[PROTON]][c] '''+''' 1.0 [[UDP-GLUCURONATE]][c] '''=>''' 1.0 [[CARBON-DIOXIDE]][c] '''+''' 1.0 [[UDP-D-XYLOSE]][c]
+
* 1 [[4-hydroxybenzoate]][c] '''+''' 1 [[OCTAPRENYL-DIPHOSPHATE]][c] '''=>''' 1 [[3-OCTAPRENYL-4-HYDROXYBENZOATE]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ00231]]
+
* Gene: [[SJ03479]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ09061]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6708]], ubiquinol-8 biosynthesis (prokaryotic):
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5870]], ubiquinol-8 biosynthesis (eukaryotic):
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27783 27783]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R05615 R05615]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=udp-glucuronate decarboxylase}}
+
{{#set: ec-number=ec-2.5.1.39}}
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:04, 5 January 2021

Reaction 4OHBENZOATE-OCTAPRENYLTRANSFER-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6708, ubiquinol-8 biosynthesis (prokaryotic):
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-5870, ubiquinol-8 biosynthesis (eukaryotic):
    • 4 reactions found over 9 reactions in the full pathway

Reconstruction information

External links