Difference between revisions of "RXN3O-9780"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15581 RXN-15581] == * direction: ** left-to-right * common-name: ** d-serine ammonia-lyase == R...")
(Created page with "Category:reaction == Reaction RXN3O-9780 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1] == Reaction formula == * 1 CO-A[...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15581 RXN-15581] ==
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== Reaction RXN3O-9780 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
+
* ec-number:
** d-serine ammonia-lyase
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** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[D-SERINE]][c] '''=>''' 1 [[2-AMINOACRYLATE]][c] '''+''' 1 [[WATER]][c]
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* 1 [[CO-A]][c] '''+''' 1 [[Palmitoyl-ACPs]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[PALMITYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ15468]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY0-1535]], D-serine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1535 PWY0-1535]
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* [[PWY-7746]], mycobacterial sulfolipid biosynthesis:
** '''1''' reactions found over '''3''' reactions in the full pathway
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** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5994]], palmitate biosynthesis (type I fatty acid synthase):
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** '''31''' reactions found over '''31''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
* RHEA:
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* LIGAND-RXN:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43009 43009]
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** [http://www.genome.jp/dbget-bin/www_bget?R10700 R10700]
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* METANETX-RXN : MNXR114020
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=d-serine ammonia-lyase}}
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{{#set: ec-number=ec-2.3.1}}
{{#set: nb gene associated=1}}
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{{#set: nb gene associated=0}}
{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=2}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction tool=meneco}}
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction comment=added for gapfilling}}
{{#set: reconstruction source=saccharina_japonica_genome}}
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{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN3O-9780

  • direction:
    • left-to-right
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7746, mycobacterial sulfolipid biosynthesis:
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis (type I fatty acid synthase):
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR114020