Difference between revisions of "RXN3O-9780"

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(Created page with "Category:reaction == Reaction N-CARBAMOYLPUTRESCINE-AMIDASE-RXN == * direction: ** left-to-right * common-name: ** n-carbamoylputrescine amidohydrolase * ec-number: ** [ht...")
(Created page with "Category:reaction == Reaction RXN3O-9780 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1] == Reaction formula == * 1 CO-A[...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction N-CARBAMOYLPUTRESCINE-AMIDASE-RXN ==
+
== Reaction RXN3O-9780 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** n-carbamoylputrescine amidohydrolase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.1.53 ec-3.5.1.53]
+
** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-597]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PUTRESCINE]][c]
+
* 1 [[CO-A]][c] '''+''' 1 [[Palmitoyl-ACPs]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[PALMITYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06121]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-43]], putrescine biosynthesis II:
+
* [[PWY-7746]], mycobacterial sulfolipid biosynthesis:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''9''' reactions in the full pathway
−
* [[ARGDEG-III-PWY]], L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway):
+
* [[PWY-5994]], palmitate biosynthesis (type I fatty acid synthase):
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''31''' reactions found over '''31''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22285 22285]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01152 R01152]
+
** [http://www.genome.jp/dbget-bin/www_bget?R10700 R10700]
 +
* METANETX-RXN : MNXR114020
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=n-carbamoylputrescine amidohydrolase}}
+
{{#set: ec-number=ec-2.3.1}}
−
{{#set: ec-number=ec-3.5.1.53}}
+
{{#set: nb gene associated=0}}
−
{{#set: nb gene associated=1}}
 
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN3O-9780

  • direction:
    • left-to-right
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7746, mycobacterial sulfolipid biosynthesis:
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis (type I fatty acid synthase):
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR114020





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