Difference between revisions of "RXN490-3641"

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(Created page with "Category:reaction == Reaction THRESYN-RXN == * direction: ** left-to-right * common-name: ** threonine synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.2.3.1 ec-4.2...")
(Created page with "Category:reaction == Reaction RXN490-3641 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11.57 ec-1.14.11.57] * synonymous: ** proline...")
 
(5 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction THRESYN-RXN ==
+
== Reaction RXN490-3641 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** threonine synthase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.3.1 ec-4.2.3.1]
+
** [http://enzyme.expasy.org/EC/1.14.11.57 ec-1.14.11.57]
 +
* synonymous:
 +
** proline hydroxylase
 +
** protocollagen hydroxylase
 +
** prolyl 4-hydroxylase
 +
** proline,2-oxoglutarate 4-dioxygenase
 +
** prolyl hydroxylase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[O-PHOSPHO-L-HOMOSERINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[THR]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PRO]][c] '''=>''' 1 [[4-HYDROXY-L-PROLINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11569]]
+
* Gene: [[SJ10762]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ20526]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ20511]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[HOMOSER-THRESYN-PWY]], L-threonine biosynthesis:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR103186
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10841 10841]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=51509 51509]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01466 R01466]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01252 R01252]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P04990 P04990]
 
−
** [http://www.uniprot.org/uniprot/Q9Y9K2 Q9Y9K2]
 
−
** [http://www.uniprot.org/uniprot/O28953 O28953]
 
−
** [http://www.uniprot.org/uniprot/P66902 P66902]
 
−
** [http://www.uniprot.org/uniprot/O59293 O59293]
 
−
** [http://www.uniprot.org/uniprot/O66864 O66864]
 
−
** [http://www.uniprot.org/uniprot/Q9PPA8 Q9PPA8]
 
−
** [http://www.uniprot.org/uniprot/O58587 O58587]
 
−
** [http://www.uniprot.org/uniprot/Q9V0P1 Q9V0P1]
 
−
** [http://www.uniprot.org/uniprot/Q9V190 Q9V190]
 
−
** [http://www.uniprot.org/uniprot/O26354 O26354]
 
−
** [http://www.uniprot.org/uniprot/O29700 O29700]
 
−
** [http://www.uniprot.org/uniprot/Q9WZ16 Q9WZ16]
 
−
** [http://www.uniprot.org/uniprot/Q9UZV8 Q9UZV8]
 
−
** [http://www.uniprot.org/uniprot/Q9JU91 Q9JU91]
 
−
** [http://www.uniprot.org/uniprot/Q9CDV8 Q9CDV8]
 
−
** [http://www.uniprot.org/uniprot/P44503 P44503]
 
−
** [http://www.uniprot.org/uniprot/Q58860 Q58860]
 
−
** [http://www.uniprot.org/uniprot/O66740 O66740]
 
−
** [http://www.uniprot.org/uniprot/O50114 O50114]
 
−
** [http://www.uniprot.org/uniprot/Q9YBW2 Q9YBW2]
 
−
** [http://www.uniprot.org/uniprot/P23669 P23669]
 
−
** [http://www.uniprot.org/uniprot/P27735 P27735]
 
−
** [http://www.uniprot.org/uniprot/Q00063 Q00063]
 
−
** [http://www.uniprot.org/uniprot/P74193 P74193]
 
−
** [http://www.uniprot.org/uniprot/P73711 P73711]
 
−
** [http://www.uniprot.org/uniprot/P16120 P16120]
 
−
** [http://www.uniprot.org/uniprot/P00934 P00934]
 
−
** [http://www.uniprot.org/uniprot/P29363 P29363]
 
−
** [http://www.uniprot.org/uniprot/Q9S7B5 Q9S7B5]
 
−
** [http://www.uniprot.org/uniprot/P45837 P45837]
 
−
** [http://www.uniprot.org/uniprot/Q42598 Q42598]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=threonine synthase}}
+
{{#set: ec-number=ec-1.14.11.57}}
−
{{#set: ec-number=ec-4.2.3.1}}
+
{{#set: synonymous=proline hydroxylase|protocollagen hydroxylase|prolyl 4-hydroxylase|proline,2-oxoglutarate 4-dioxygenase|prolyl hydroxylase}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN490-3641

  • direction:
    • left-to-right
  • ec-number:
  • synonymous:
    • proline hydroxylase
    • protocollagen hydroxylase
    • prolyl 4-hydroxylase
    • proline,2-oxoglutarate 4-dioxygenase
    • prolyl hydroxylase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR103186
  • RHEA:
  • LIGAND-RXN:





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