Difference between revisions of "RXN4FS-2"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-10745 == * direction: ** left-to-right * common-name: ** nad(p)h oxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.6.3.1 ec-1.6.3.1]...")
(Created page with "Category:reaction == Reaction THIAZOLSYN2-RXN == * direction: ** left-to-right * common-name: ** 1-deoxy-d-xylulose 5-phosphate:thiol sulfurtransferase * ec-number: ** [ht...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-10745 ==
+
== Reaction THIAZOLSYN2-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** nad(p)h oxidase
+
** 1-deoxy-d-xylulose 5-phosphate:thiol sulfurtransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.6.3.1 ec-1.6.3.1]
+
** [http://enzyme.expasy.org/EC/2.8.1.10 ec-2.8.1.10]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
+
* 1 [[CPD-12279]][c] '''+''' 1 [[DEOXYXYLULOSE-5P]][c] '''+''' 1 [[Thiocarboxyadenylated-ThiS-Proteins]][c] '''=>''' 1 [[CPD-13575]][c] '''+''' 1 [[Thi-S]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ17412]]
−
* Gene: [[SJ21871]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ15786]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ04490]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ20902]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ13844]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07838]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13845]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10966]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ02571]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ02559]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6891]], thiazole biosynthesis II (aerobic bacteria):
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria):
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R10247 R10247]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11267 11267]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26300 26300]
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11263 11263]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R07172 R07172]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nad(p)h oxidase}}
+
{{#set: common-name=1-deoxy-d-xylulose 5-phosphate:thiol sulfurtransferase}}
−
{{#set: ec-number=ec-1.6.3.1}}
+
{{#set: ec-number=ec-2.8.1.10}}
−
{{#set: nb gene associated=10}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:05, 5 January 2021

Reaction THIAZOLSYN2-RXN

  • direction:
    • left-to-right
  • common-name:
    • 1-deoxy-d-xylulose 5-phosphate:thiol sulfurtransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6891, thiazole biosynthesis II (aerobic bacteria):
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-6892, thiazole biosynthesis I (facultative anaerobic bacteria):
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN4FS-2&oldid=63747"