Difference between revisions of "RXN66-12"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY] == <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; over...")
(Created page with "Category:reaction == Reaction 3-HYDROXYDECANOYL-ACP-DEHYDR-RXN == * direction: ** left-to-right * common-name: ** fatty acid synthase ** 3-hydroxyacyl-[acp] dehydratase *...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY] ==
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== Reaction 3-HYDROXYDECANOYL-ACP-DEHYDR-RXN ==
 +
* direction:
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** left-to-right
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* common-name:
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** fatty acid synthase
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** 3-hydroxyacyl-[acp] dehydratase
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* ec-number:
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** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
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** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
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== Reaction formula ==
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* 1 [[OH-ACYL-ACP]][c] '''=>''' 1 [[TRANS-D2-ENOYL-ACP]][c] '''+''' 1 [[WATER]][c]
 +
== Gene(s) associated with this reaction  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* taxonomic-range:
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* Gene: [[SJ10624]]
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-1117 tax-1117]
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** Category: [[annotation]]
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-39119 tax-39119]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-38254 tax-38254]
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* Gene: [[SJ10275]]
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-29197 tax-29197]
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** Category: [[annotation]]
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-38410 tax-38410]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-5747 tax-5747]
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* Gene: [[SJ04769]]
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2864 tax-2864]
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** Category: [[annotation]]
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-877183 tax-877183]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2836 tax-2836]
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* Gene: [[SJ00320]]
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-3027 tax-3027]
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** Category: [[annotation]]
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2830 tax-2830]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2833 tax-2833]
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* Gene: [[SJ03883]]
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-3041 tax-3041]
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** Category: [[annotation]]
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33682 tax-33682]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2763 tax-2763]
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* Gene: [[SJ06617]]
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2870 tax-2870]
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** Category: [[annotation]]
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2825 tax-2825]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
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* Gene: [[SJ00613]]
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090]
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** Category: [[annotation]]
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* common-name:
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** calvin-benson-bassham cycle
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* Gene: [[SJ18059]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ06616]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ17743]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ04443]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ13014]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ19629]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ11672]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ06944]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ15983]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
</div>
 
</div>
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== Reaction(s) found ==
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== Pathway(s) ==
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* [[1TRANSKETO-RXN]]
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* [[FASYN-ELONG-PWY]], fatty acid elongation -- saturated:
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* [[2TRANSKETO-RXN]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[F16ALDOLASE-RXN]]
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== Reconstruction information  ==
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* [[F16BDEPHOS-RXN]]
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PHOSGLYPHOS-RXN]]
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== External links  ==
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* [[PHOSPHORIBULOKINASE-RXN]]
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* RHEA:
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* [[RIB5PISOM-RXN]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13098 13098]
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* [[RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN]]
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* LIGAND-RXN:
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* [[RIBULP3EPIM-RXN]]
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** [http://www.genome.jp/dbget-bin/www_bget?R10208 R10208]
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* [[SEDOBISALDOL-RXN]]
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* UNIPROT:
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* [[SEDOHEPTULOSE-BISPHOSPHATASE-RXN]]
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** [http://www.uniprot.org/uniprot/P0A6Q3 P0A6Q3]
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* [[TRIOSEPISOMERIZATION-RXN]]
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** [http://www.uniprot.org/uniprot/P45159 P45159]
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== Reaction(s) not found ==
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{{#set: direction=left-to-right}}
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* [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.13-RXN 1.2.1.13-RXN]
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{{#set: common-name=fatty acid synthase|3-hydroxyacyl-[acp] dehydratase}}
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{{#set: taxonomic-range=tax-3041|tax-39119|tax-33682|tax-33090|tax-2763|tax-877183|tax-29197|tax-2|tax-1117|tax-2870|tax-38254|tax-3027|tax-2836|tax-2864|tax-2825|tax-38410|tax-2833|tax-2830|tax-5747}}
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{{#set: ec-number=ec-2.3.1.86|ec-2.3.1.85|ec-4.2.1.59}}
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{{#set: common-name=calvin-benson-bassham cycle}}
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{{#set: nb gene associated=16}}
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{{#set: nb reaction found=12}}
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{{#set: nb pathway associated=1}}
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{{#set: completion rate=0.92}}
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{{#set: reconstruction category=annotation}}
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{{#set: nb total reaction=13}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:43, 18 December 2020

Reaction 3-HYDROXYDECANOYL-ACP-DEHYDR-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • FASYN-ELONG-PWY, fatty acid elongation -- saturated:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "3-hydroxyacyl-[acp] dehydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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