Difference between revisions of "RXN66-14"

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(Created page with "Category:reaction == Reaction RXN-15007 == * direction: ** reversible * common-name: ** [lysw]-l-glutamate 5-semialdehyde transaminase * ec-number: ** [http://enzyme.expas...")
(Created page with "Category:reaction == Reaction RXN-19202 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.13 ec-1.14.13] == Reaction formula == * 1 CPD-...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-15007 ==
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== Reaction RXN-19202 ==
 
* direction:
 
* direction:
−
** reversible
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** left-to-right
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* common-name:
 
−
** [lysw]-l-glutamate 5-semialdehyde transaminase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.11 ec-2.6.1.11]
+
** [http://enzyme.expasy.org/EC/1.14.13 ec-1.14.13]
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[LysW-L-ornithine]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[LysW-L-glutamate-5-semialdehyde]][c]
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* 1 [[CPD-20693]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-20680]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07216]]
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* Gene: [[SJ20456]]
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** Category: [[annotation]]
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** Category: [[manual]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
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** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria):
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* [[PWY-7949]], diadinoxanthin and diatoxanthin interconversion:
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** '''7''' reactions found over '''9''' reactions in the full pathway
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[sjap]]; tool: [[curation]]; comment: transformation of diadinoxanthin into diatoxanthin (second cycle of xanthophylls)
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: direction=left-to-right}}
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** [http://www.genome.jp/dbget-bin/www_bget?R10932 R10932]
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{{#set: ec-number=ec-1.14.13}}
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=52675 52675]
 
−
{{#set: direction=reversible}}
 
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{{#set: common-name=[lysw]-l-glutamate 5-semialdehyde transaminase}}
 
−
{{#set: ec-number=ec-2.6.1.11}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction comment=transformation of diadinoxanthin into diatoxanthin (second cycle of xanthophylls)}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=sjap}}

Revision as of 08:36, 15 March 2021

Reaction RXN-19202

Reaction formula

Gene(s) associated with this reaction

  • Gene: SJ20456
    • Category: manual
      • Source: sjap, Tool: unknown-tool, Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)

Pathway(s)

  • PWY-7949, diadinoxanthin and diatoxanthin interconversion:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

  • category: manual; source: sjap; tool: curation; comment: transformation of diadinoxanthin into diatoxanthin (second cycle of xanthophylls)

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN66-14&oldid=128704"