Difference between revisions of "RXN66-221"

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(Created page with "Category:reaction == Reaction 2-KETO-ADIPATE-DEHYDROG-RXN == * direction: ** left-to-right == Reaction formula == * 1 2K-ADIPATE[c] '''+''' 1 CO-A[c] '''+''' 1 N...")
(Created page with "Category:reaction == Reaction RXN66-221 == * direction: ** left-to-right * common-name: ** dopa decarboxylase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.28 ec-4.1....")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2-KETO-ADIPATE-DEHYDROG-RXN ==
+
== Reaction RXN66-221 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** dopa decarboxylase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/4.1.1.28 ec-4.1.1.28]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2K-ADIPATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[GLUTARYL-COA]][c] '''+''' 1 [[NADH]][c]
+
* 1 [[L-DIHYDROXY-PHENYLALANINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DOPAMINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19201]]
+
* Gene: [[SJ11952]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ13629]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ06474]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5652]], 2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA:
+
* [[PWY66-301]], catecholamine biosynthesis:
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY66-425]], L-lysine degradation II (L-pipecolate pathway):
+
* [[PWY-5403]], betaxanthin biosynthesis (via dopamine):
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[LYSINE-DEG1-PWY]], L-lysine degradation XI (mammalian):
+
* [[PWY-5426]], betaxanthin biosynthesis:
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3581]], (S)-reticuline biosynthesis I:
 +
** '''6''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR94818
+
* METANETX-RXN : MNXR107302
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30796 30796]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12273 12273]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01933 R01933]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02080 R02080]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=3}}
+
{{#set: common-name=dopa decarboxylase}}
−
{{#set: nb pathway associated=3}}
+
{{#set: ec-number=ec-4.1.1.28}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: nb pathway associated=4}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN66-221

  • direction:
    • left-to-right
  • common-name:
    • dopa decarboxylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-301, catecholamine biosynthesis:
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5403, betaxanthin biosynthesis (via dopamine):
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5426, betaxanthin biosynthesis:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-3581, (S)-reticuline biosynthesis I:
    • 6 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR107302
  • RHEA:
  • LIGAND-RXN:





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