Difference between revisions of "RXN66-281"
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(Created page with "Category:reaction == Reaction RXN-7647 == * direction: ** left-to-right * common-name: ** chalcone isomerase * ec-number: ** [http://enzyme.expasy.org/EC/5.5.1.6 ec-5.5.1....") |
(Created page with "Category:reaction == Reaction RXN66-281 == * direction: ** left-to-right * common-name: ** squalene synthase ** farnesyl-diphosphate farnesyltransferase ** presqualene dip...") |
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| (One intermediate revision by one other user not shown) | |||
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[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN66-281 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** squalene synthase |
| − | * | + | ** farnesyl-diphosphate farnesyltransferase |
| − | ** | + | ** presqualene diphosphate:farnesyl-diphosphate farnesyltransferase |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[CPD- | + | * 1 [[CPD-465]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[SQUALENE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ13532]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| − | * Gene: [[ | + | * Gene: [[SJ02885]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
| − | |||
| − | |||
== Pathway(s) == | == Pathway(s) == | ||
| − | |||
| − | |||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * METANETX-RXN : MNXR123706 | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R02872 R02872] |
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=squalene synthase|presqualene diphosphate:farnesyl-diphosphate farnesyltransferase|farnesyl-diphosphate farnesyltransferase}} |
| − | |||
{{#set: nb gene associated=2}} | {{#set: nb gene associated=2}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=0}} |
| − | {{#set: reconstruction category=annotation | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction tool=pathwaytools | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Latest revision as of 11:23, 18 March 2021
Contents
Reaction RXN66-281
- direction:
- left-to-right
- common-name:
- squalene synthase
- farnesyl-diphosphate farnesyltransferase
- presqualene diphosphate:farnesyl-diphosphate farnesyltransferase
Reaction formula
- 1 CPD-465[c] + 1 NADH-P-OR-NOP[c] + 1 PROTON[c] => 1 NAD-P-OR-NOP[c] + 1 PPI[c] + 1 SQUALENE[c]
Gene(s) associated with this reaction
- Gene: SJ13532
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ02885
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- METANETX-RXN : MNXR123706
- LIGAND-RXN:
