Difference between revisions of "RXN66-281"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7616 PWY-7616] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] *...")
(Created page with "Category:reaction == Reaction 3.1.13.4-RXN == * direction: ** left-to-right * common-name: ** poly(a)-specific ribonuclease * ec-number: ** [http://enzyme.expasy.org/EC/3....")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7616 PWY-7616] ==
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== Reaction 3.1.13.4-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
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** left-to-right
 
* common-name:
 
* common-name:
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** methanol oxidation to carbon dioxide
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** poly(a)-specific ribonuclease
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== Reaction(s) found ==
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* ec-number:
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* [[METHANOL-DEHYDROGENASE-RXN]]
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** [http://enzyme.expasy.org/EC/3.1.13.4 ec-3.1.13.4]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=FORMALDEHYDE-DEHYDROGENASE-RXN FORMALDEHYDE-DEHYDROGENASE-RXN]
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* n [[WATER]][c] '''+''' 1 [[mRNAs-With-PolyA-Tails]][c] '''=>''' n [[AMP]][c] '''+''' 1 [[mRNAs]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-3281 RXN0-3281]
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== Gene(s) associated with this reaction  ==
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{{#set: taxonomic-range=tax-2}}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: common-name=methanol oxidation to carbon dioxide}}
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* Gene: [[SJ02384]]
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{{#set: nb reaction found=1}}
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** Category: [[annotation]]
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{{#set: completion rate=0.33}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: nb total reaction=3}}
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* Gene: [[SJ13458]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ05576]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ03509]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ06404]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ10605]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ18467]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ10711]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ20721]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ16005]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ12089]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ17483]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ08676]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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</div>
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== Pathway(s) ==
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P32521 P32521]
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** [http://www.uniprot.org/uniprot/Q09798 Q09798]
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{{#set: direction=left-to-right}}
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{{#set: common-name=poly(a)-specific ribonuclease}}
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{{#set: ec-number=ec-3.1.13.4}}
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{{#set: nb gene associated=13}}
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{{#set: nb pathway associated=0}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:45, 18 December 2020

Reaction 3.1.13.4-RXN

  • direction:
    • left-to-right
  • common-name:
    • poly(a)-specific ribonuclease
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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