Difference between revisions of "RXN66-305"

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(Created page with "Category:reaction == Reaction ALKAPHOSPHA-RXN == * direction: ** left-to-right * common-name: ** alkaline phosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.1...")
(Created page with "Category:reaction == Reaction RXN-12567 == * direction: ** left-to-right * common-name: ** enoyl-coa hydratase ** 3-hydroxyhexanoyl-coa dehydratase * ec-number: ** [http:/...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ALKAPHOSPHA-RXN ==
+
== Reaction RXN-12567 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** alkaline phosphatase
+
** enoyl-coa hydratase
 +
** 3-hydroxyhexanoyl-coa dehydratase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.3.1 ec-3.1.3.1]
+
** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Orthophosphoric-Monoesters]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Alcohols]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[OH-HEXANOYL-COA]][c] '''=>''' 1 [[CPD0-2121]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13017]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ00040]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03913]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03584]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ21215]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ10275]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21390]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ11088]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07211]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ01423]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ14591]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ13863]]
+
</div>
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6863]], pyruvate fermentation to hexanol (engineered):
 +
** '''9''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15018 15018]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30549 30549]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00626 R00626]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04749 R04749]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P08289 P08289]
 
−
** [http://www.uniprot.org/uniprot/P09487 P09487]
 
−
** [http://www.uniprot.org/uniprot/Q8JZS4 Q8JZS4]
 
−
** [http://www.uniprot.org/uniprot/Q05205 Q05205]
 
−
** [http://www.uniprot.org/uniprot/P24822 P24822]
 
−
** [http://www.uniprot.org/uniprot/P19406 P19406]
 
−
** [http://www.uniprot.org/uniprot/P19405 P19405]
 
−
** [http://www.uniprot.org/uniprot/Q9UZV2 Q9UZV2]
 
−
** [http://www.uniprot.org/uniprot/P21948 P21948]
 
−
** [http://www.uniprot.org/uniprot/Q47487 Q47487]
 
−
** [http://www.uniprot.org/uniprot/P00634 P00634]
 
−
** [http://www.uniprot.org/uniprot/Q47489 Q47489]
 
−
** [http://www.uniprot.org/uniprot/Q47488 Q47488]
 
−
** [http://www.uniprot.org/uniprot/Q47486 Q47486]
 
−
** [http://www.uniprot.org/uniprot/Q47485 Q47485]
 
−
** [http://www.uniprot.org/uniprot/Q47484 Q47484]
 
−
** [http://www.uniprot.org/uniprot/P05187 P05187]
 
−
** [http://www.uniprot.org/uniprot/P05186 P05186]
 
−
** [http://www.uniprot.org/uniprot/P09923 P09923]
 
−
** [http://www.uniprot.org/uniprot/P15693 P15693]
 
−
** [http://www.uniprot.org/uniprot/P10696 P10696]
 
−
** [http://www.uniprot.org/uniprot/Q7M2K9 Q7M2K9]
 
−
** [http://www.uniprot.org/uniprot/Q7M2K8 Q7M2K8]
 
−
** [http://www.uniprot.org/uniprot/P51740 P51740]
 
−
** [http://www.uniprot.org/uniprot/P19111 P19111]
 
−
** [http://www.uniprot.org/uniprot/Q29486 Q29486]
 
−
** [http://www.uniprot.org/uniprot/P11491 P11491]
 
−
** [http://www.uniprot.org/uniprot/P72715 P72715]
 
−
** [http://www.uniprot.org/uniprot/Q9ZP14 Q9ZP14]
 
−
** [http://www.uniprot.org/uniprot/Q01343 Q01343]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=alkaline phosphatase}}
+
{{#set: common-name=3-hydroxyhexanoyl-coa dehydratase|enoyl-coa hydratase}}
−
{{#set: ec-number=ec-3.1.3.1}}
+
{{#set: ec-number=ec-4.2.1.17}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=7}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:06, 5 January 2021

Reaction RXN-12567

  • direction:
    • left-to-right
  • common-name:
    • enoyl-coa hydratase
    • 3-hydroxyhexanoyl-coa dehydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6863, pyruvate fermentation to hexanol (engineered):
    • 9 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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