Difference between revisions of "RXN66-318"

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(Created page with "Category:reaction == Reaction L-IDITOL-2-DEHYDROGENASE-RXN == * direction: ** reversible * common-name: ** l-iditol dehydrogenase * ec-number: ** [http://enzyme.expasy.org...")
(Created page with "Category:reaction == Reaction RXN66-318 == * direction: ** left-to-right * common-name: ** 4α-carboxy-5α-cholesta-8,24-dien-3β-ol:nad(p)+ 3-dehydrogenase...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction L-IDITOL-2-DEHYDROGENASE-RXN ==
+
== Reaction RXN66-318 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** l-iditol dehydrogenase
+
** 4α-carboxy-5α-cholesta-8,24-dien-3β-ol:nad(p)+ 3-dehydrogenase (decarboxylating)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.14 ec-1.1.1.14]
+
** [http://enzyme.expasy.org/EC/1.1.1.170 ec-1.1.1.170]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-369]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[CPD-15616]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-4702]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-4581]][c] '''+''' 1 [[NADH-P-OR-NOP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17488]]
+
* Gene: [[SJ04782]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6074]], zymosterol biosynthesis:
 +
** '''6''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol):
 +
** '''14''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY66-341]], cholesterol biosynthesis I:
 +
** '''14''' reactions found over '''18''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_sjap]]; tool: [[curation]]; comment: curation sterols (girard et al.)
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR123718
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10163 10163]
+
{{#set: direction=left-to-right}}
−
* LIGAND-RXN:
+
{{#set: common-name=4&alpha;-carboxy-5&alpha;-cholesta-8,24-dien-3&beta;-ol:nad(p)+ 3-dehydrogenase (decarboxylating)}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R07145 R07145]
+
{{#set: ec-number=ec-1.1.1.170}}
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q06004 Q06004]
 
−
** [http://www.uniprot.org/uniprot/Q00796 Q00796]
 
−
** [http://www.uniprot.org/uniprot/Q57517 Q57517]
 
−
** [http://www.uniprot.org/uniprot/P77280 P77280]
 
−
** [http://www.uniprot.org/uniprot/O35045 O35045]
 
−
** [http://www.uniprot.org/uniprot/P27867 P27867]
 
−
** [http://www.uniprot.org/uniprot/Q02912 Q02912]
 
−
** [http://www.uniprot.org/uniprot/P36624 P36624]
 
−
** [http://www.uniprot.org/uniprot/P35497 P35497]
 
−
** [http://www.uniprot.org/uniprot/Q64442 Q64442]
 
−
** [http://www.uniprot.org/uniprot/Q07786 Q07786]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=l-iditol dehydrogenase}}
 
−
{{#set: ec-number=ec-1.1.1.14}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=manual|annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=curation|pathwaytools}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=n.a|curation sterols (girard et al.)}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=reactions_add_sjap|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN66-318

  • direction:
    • left-to-right
  • common-name:
    • 4α-carboxy-5α-cholesta-8,24-dien-3β-ol:nad(p)+ 3-dehydrogenase (decarboxylating)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6074, zymosterol biosynthesis:
    • 6 reactions found over 14 reactions in the full pathway
  • PWY66-4, cholesterol biosynthesis III (via desmosterol):
    • 14 reactions found over 4 reactions in the full pathway
  • PWY66-341, cholesterol biosynthesis I:
    • 14 reactions found over 18 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123718





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