Difference between revisions of "RXN66-321"

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(Created page with "Category:reaction == Reaction RXN0-949 == * direction: ** left-to-right * common-name: ** lipoyl synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.8.1.8 ec-2.8.1.8]...")
(Created page with "Category:reaction == Reaction RXN66-321 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.3.1.72 ec-1.3.1.72] == Reaction formula == * 1 5-...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN0-949 ==
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== Reaction RXN66-321 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
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* common-name:
 
−
** lipoyl synthase
 
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/2.8.1.8 ec-2.8.1.8]
+
** [http://enzyme.expasy.org/EC/1.3.1.72 ec-1.3.1.72]
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[Octanoylated-domains]][c] '''+''' 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 2 [[Sulfurated-Sulfur-Acceptors]][c] '''=>''' 2 [[CH33ADO]][c] '''+''' 1 [[Lipoyl-Protein-N6-lipoyllysine]][c] '''+''' 2 [[MET]][c] '''+''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c] '''+''' 2 [[Unsulfurated-Sulfur-Acceptors]][c]
+
* 1 [[5-ALPHA-CHOLESTA-724-DIEN-3-BETA-OL]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-4186]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ03663]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ04393]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ11692]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY0-1275]], lipoate biosynthesis and incorporation II:
+
* [[PWY66-341]], cholesterol biosynthesis I:
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** '''2''' reactions found over '''2''' reactions in the full pathway
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** '''14''' reactions found over '''18''' reactions in the full pathway
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* [[PWY0-501]], lipoate biosynthesis and incorporation I:
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6987]], lipoate biosynthesis and incorporation III (Bacillus):
 
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** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
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* RHEA:
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* METANETX-RXN : MNXR109773
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16586 16586]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R07767 R07767]
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** [http://www.genome.jp/dbget-bin/www_bget?R05703 R05703]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: common-name=lipoyl synthase}}
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{{#set: ec-number=ec-1.3.1.72}}
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{{#set: ec-number=ec-2.8.1.8}}
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{{#set: nb gene associated=0}}
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{{#set: nb gene associated=3}}
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{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=3}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=added for gapfilling}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Latest revision as of 11:19, 18 March 2021

Reaction RXN66-321

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-341, cholesterol biosynthesis I:
    • 14 reactions found over 18 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR109773
  • LIGAND-RXN:





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