Difference between revisions of "RXN66-470"

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(Created page with "Category:reaction == Reaction RXN-7953 == * direction: ** left-to-right * common-name: ** [dermatan]-n-acetylgalactosamine 4-sulfate 6-o-sulfotransferase * ec-number: ** [...")
(Created page with "Category:reaction == Reaction RXN66-470 == * direction: ** left-to-right * common-name: ** 3-methyl-branched fatty acyl-coa 2-hydroxylase * ec-number: ** [http://enzyme.ex...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-7953 ==
+
== Reaction RXN66-470 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** [dermatan]-n-acetylgalactosamine 4-sulfate 6-o-sulfotransferase
+
** 3-methyl-branched fatty acyl-coa 2-hydroxylase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.8.2.33 ec-2.8.2.33]
+
** [http://enzyme.expasy.org/EC/1.14.11 ec-1.14.11]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Dermatan-NAcGal-4-sulfates]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[Dermatan-NAcGal-46-disulfates]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[3-Methyl-Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[2-OH-3-Methyl-Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ21107]]
+
* Gene: [[SJ14991]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ02013]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ10365]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6568]], dermatan sulfate biosynthesis (late stages):
+
* [[PWY66-387]], 3-methyl-branched fatty acid α-oxidation:
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
+
* METANETX-RXN : MNXR123741
** [http://www.genome.jp/dbget-bin/www_bget?R07288 R07288]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=[dermatan]-n-acetylgalactosamine 4-sulfate 6-o-sulfotransferase}}
+
{{#set: common-name=3-methyl-branched fatty acyl-coa 2-hydroxylase}}
{{#set: ec-number=ec-2.8.2.33}}
+
{{#set: ec-number=ec-1.14.11}}
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=3}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN66-470

  • direction:
    • left-to-right
  • common-name:
    • 3-methyl-branched fatty acyl-coa 2-hydroxylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-387, 3-methyl-branched fatty acid α-oxidation:
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123741