Difference between revisions of "RXN66-476"

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(Created page with "Category:reaction == Reaction AAL_LPAREN_fum_RPAREN_ == * direction: ** left-to-right * common-name: ** n6-(1,2-dicarboxyethyl)amp amp-lyase (fumarate-forming) == Reaction...")
(Created page with "Category:reaction == Reaction H2NEOPTERINALDOL-RXN == * direction: ** left-to-right * common-name: ** dihydroneopterin aldolase * ec-number: ** [http://enzyme.expasy.org/E...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction AAL_LPAREN_fum_RPAREN_ ==
+
== Reaction H2NEOPTERINALDOL-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** n6-(1,2-dicarboxyethyl)amp amp-lyase (fumarate-forming)
+
** dihydroneopterin aldolase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/4.1.2.25 ec-4.1.2.25]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[ADENYLOSUCC]][c] '''=>''' 1.0 [[AMP]][c] '''+''' 1.0 [[FUM]][c]
+
* 1 [[DIHYDRO-NEO-PTERIN]][c] '''=>''' 1 [[AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE]][c] '''+''' 1 [[GLYCOLALDEHYDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06544]]
+
* Gene: [[SJ22398]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6797]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (Methanocaldococcus):
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6148]], tetrahydromethanopterin biosynthesis:
 +
** '''2''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia):
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10541 10541]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03504 R03504]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P22291 P22291]
 +
** [http://www.uniprot.org/uniprot/Q9CGE4 Q9CGE4]
 +
** [http://www.uniprot.org/uniprot/Q9JUL3 Q9JUL3]
 +
** [http://www.uniprot.org/uniprot/P28823 P28823]
 +
** [http://www.uniprot.org/uniprot/P29251 P29251]
 +
** [http://www.uniprot.org/uniprot/P53848 P53848]
 +
** [http://www.uniprot.org/uniprot/O75013 O75013]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=n6-(1,2-dicarboxyethyl)amp amp-lyase (fumarate-forming)}}
+
{{#set: common-name=dihydroneopterin aldolase}}
 +
{{#set: ec-number=ec-4.1.2.25}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:36, 5 January 2021

Reaction H2NEOPTERINALDOL-RXN

  • direction:
    • left-to-right
  • common-name:
    • dihydroneopterin aldolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6797, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (Methanocaldococcus):
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6148, tetrahydromethanopterin biosynthesis:
    • 2 reactions found over 14 reactions in the full pathway
  • PWY-6147, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7539, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia):
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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