Difference between revisions of "RXN66-476-CPD-388/NAD/WATER//CPD-8462/NADH/PROTON.40."

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(Created page with "Category:reaction == Reaction 325-BISPHOSPHATE-NUCLEOTIDASE-RXN == * direction: ** left-to-right * common-name: ** 3'(2'),5'-bisphosphate nucleotidase ** adenosine-3'(2'),...")
(Created page with "Category:reaction == Reaction RXN-14387 == * direction: ** left-to-right == Reaction formula == * 1 CD-2S-SP-Complex[c] '''+''' 2 FE+3[c] '''=>''' 1 CD-SP-2Fe2S-...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 325-BISPHOSPHATE-NUCLEOTIDASE-RXN ==
+
== Reaction RXN-14387 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 3'(2'),5'-bisphosphate nucleotidase
 
−
** adenosine-3'(2'),5'-bisphosphate nucleotidase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.1.3.7 ec-3.1.3.7]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-5-ADP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Pi]][c]
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* 1 [[CD-2S-SP-Complex]][c] '''+''' 2 [[FE+3]][c] '''=>''' 1 [[CD-SP-2Fe2S-Complex]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11258]]
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* Gene: [[SJ14397]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ15444]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ05836]]
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* Gene: [[SJ19327]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ01133]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7250]], [2Fe-2S] iron-sulfur cluster biosynthesis:
 +
** '''5''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10041 10041]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00188 R00188]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q40639 Q40639]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3'(2'),5'-bisphosphate nucleotidase|adenosine-3'(2'),5'-bisphosphate nucleotidase}}
+
{{#set: nb gene associated=2}}
−
{{#set: ec-number=ec-3.1.3.7}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb gene associated=4}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:31, 5 January 2021

Reaction RXN-14387

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7250, [2Fe-2S] iron-sulfur cluster biosynthesis:
    • 5 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN66-476-CPD-388/NAD/WATER//CPD-8462/NADH/PROTON.40.&oldid=75084"