Difference between revisions of "RXN66-478"

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(Created page with "Category:reaction == Reaction PGPPHOSPHA-RXN == * direction: ** left-to-right * common-name: ** phosphatidylglycerophosphatase * ec-number: ** [http://enzyme.expasy.org/EC...")
(Created page with "Category:reaction == Reaction RXN66-478 == * direction: ** left-to-right * common-name: ** phytol dehydrogenase ** alcohol dehydrogenase (nad) * ec-number: ** [http://enzy...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PGPPHOSPHA-RXN ==
+
== Reaction RXN66-478 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** phosphatidylglycerophosphatase
+
** phytol dehydrogenase
 +
** alcohol dehydrogenase (nad)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.3.27 ec-3.1.3.27]
+
** [http://enzyme.expasy.org/EC/1.1.1.1 ec-1.1.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-1-PHOSPHATIDYL-GLYCEROL-P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-1-PHOSPHATIDYL-GLYCEROL]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[NAD]][c] '''+''' 1 [[PHYTOL]][c] '''=>''' 1 [[CPD-14926]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19931]]
+
* Gene: [[SJ14768]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21601]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ14627]]
+
* Gene: [[SJ07759]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY4FS-7]], phosphatidylglycerol biosynthesis I (plastidic):
+
* [[PWY66-389]], phytol degradation:
−
** '''3''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus):
 
−
** '''6''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY0-1545]], cardiolipin biosynthesis III:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5269]], cardiolipin biosynthesis II:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5668]], cardiolipin biosynthesis I:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY4FS-8]], phosphatidylglycerol biosynthesis II (non-plastidic):
 
−
** '''3''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR123748
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16725 16725]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02029 R02029]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P18200 P18200]
 
−
** [http://www.uniprot.org/uniprot/Q9JRA8 Q9JRA8]
 
−
** [http://www.uniprot.org/uniprot/Q9PM65 Q9PM65]
 
−
** [http://www.uniprot.org/uniprot/P0A924 P0A924]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=phosphatidylglycerophosphatase}}
+
{{#set: common-name=phytol dehydrogenase|alcohol dehydrogenase (nad)}}
−
{{#set: ec-number=ec-3.1.3.27}}
+
{{#set: ec-number=ec-1.1.1.1}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN66-478

  • direction:
    • left-to-right
  • common-name:
    • phytol dehydrogenase
    • alcohol dehydrogenase (nad)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-389, phytol degradation:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123748





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