Difference between revisions of "RXN66-480"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6002 PWY-6002] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-3465 tax-34...")
(Created page with "Category:reaction == Reaction RXN66-480 == * direction: ** left-to-right * common-name: ** phytenoyl-coa synthetase ** acyl-coa synthetase ** long-chain fatty acid-coa lig...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6002 PWY-6002] ==
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== Reaction RXN66-480 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-3465 tax-3465]
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-4004 tax-4004]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-3803 tax-3803]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-3977 tax-3977]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-4210 tax-4210]
 
 
* common-name:
 
* common-name:
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** lotaustralin degradation
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** phytenoyl-coa synthetase
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== Reaction(s) found ==
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** acyl-coa synthetase
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* [[RXN-9674]]
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** long-chain fatty acid-coa ligase
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== Reaction(s) not found ==
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* ec-number:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11733 RXN-11733]
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** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
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{{#set: taxonomic-range=tax-3977|tax-4210|tax-3803|tax-3465|tax-4004}}
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== Reaction formula ==
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{{#set: common-name=lotaustralin degradation}}
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* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-14927]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-14928]][c] '''+''' 1 [[PPI]][c]
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{{#set: nb reaction found=1}}
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== Gene(s) associated with this reaction  ==
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{{#set: completion rate=0.5}}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: nb total reaction=2}}
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* Gene: [[SJ08690]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ08692]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ03650]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ13972]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ08691]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ05591]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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</div>
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== Pathway(s) ==
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* [[PWY66-389]], phytol degradation:
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR123750
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{{#set: direction=left-to-right}}
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{{#set: common-name=acyl-coa synthetase|phytenoyl-coa synthetase|long-chain fatty acid-coa ligase}}
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{{#set: ec-number=ec-6.2.1.3}}
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{{#set: nb gene associated=6}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN66-480

  • direction:
    • left-to-right
  • common-name:
    • phytenoyl-coa synthetase
    • acyl-coa synthetase
    • long-chain fatty acid-coa ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-389, phytol degradation:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123750





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