Difference between revisions of "RXN66-480"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-6 PWY3O-6] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-4751...")
(Created page with "Category:reaction == Reaction RXN66-480 == * direction: ** left-to-right * common-name: ** phytenoyl-coa synthetase ** acyl-coa synthetase ** long-chain fatty acid-coa lig...")
 
(7 intermediate revisions by 2 users not shown)
Line 1: Line 1:
−
[[Category:pathway]]
+
[[Category:reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-6 PWY3O-6] ==
+
== Reaction RXN66-480 ==
−
* taxonomic-range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-4751]
+
** left-to-right
 
* common-name:
 
* common-name:
−
** dehydro-d-arabinono-1,4-lactone biosynthesis
+
** phytenoyl-coa synthetase
−
== Reaction(s) found ==
+
** acyl-coa synthetase
−
* [[1.1.3.37-RXN]]
+
** long-chain fatty acid-coa ligase
−
== Reaction(s) not found ==
+
* ec-number:
−
* [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.117-RXN 1.1.1.117-RXN]
+
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
−
* [http://metacyc.org/META/NEW-IMAGE?object=D-ARABINOSE-1-DEHYDROGENASE-RXN D-ARABINOSE-1-DEHYDROGENASE-RXN]
+
== Reaction formula ==
−
{{#set: taxonomic-range=tax-4751}}
+
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-14927]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-14928]][c] '''+''' 1 [[PPI]][c]
−
{{#set: common-name=dehydro-d-arabinono-1,4-lactone biosynthesis}}
+
== Gene(s) associated with this reaction  ==
−
{{#set: nb reaction found=1}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: completion rate=0.33}}
+
* Gene: [[SJ08690]]
−
{{#set: nb total reaction=3}}
+
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ08692]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ03650]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13972]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08691]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ05591]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 +
== Pathway(s)  ==
 +
* [[PWY66-389]], phytol degradation:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== External links  ==
 +
* METANETX-RXN : MNXR123750
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=acyl-coa synthetase|phytenoyl-coa synthetase|long-chain fatty acid-coa ligase}}
 +
{{#set: ec-number=ec-6.2.1.3}}
 +
{{#set: nb gene associated=6}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pathwaytools|pantograph}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN66-480

  • direction:
    • left-to-right
  • common-name:
    • phytenoyl-coa synthetase
    • acyl-coa synthetase
    • long-chain fatty acid-coa ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-389, phytol degradation:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123750





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN66-480&oldid=142136"