Difference between revisions of "RXN6666-5"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN] == * direction: **...")
(Created page with "Category:reaction == Reaction RXN6666-5 == * direction: ** left-to-right * common-name: ** aldehyde dehydrogenase (nad) ** 3,4-dihydroxyphenylacetaldehyde dehydrogenase *...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN] ==
+
== Reaction RXN6666-5 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** tryptophan decarboxylase
+
** aldehyde dehydrogenase (nad)
 +
** 3,4-dihydroxyphenylacetaldehyde dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.q ec-4.1.1.q]
+
** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PROTON]][c] '''+''' 1 [[TRP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[TRYPTAMINE]][c]
+
* 1 [[34-DIHYDROXYPHENYLACETALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-782]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11952]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ17249]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06456]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ06359]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ22552]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11331]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ05897]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11330]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ00435]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ09287]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ10107]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06470]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ06047]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-3181]], L-tryptophan degradation VI (via tryptamine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3181 PWY-3181]
+
* [[PWY6666-2]], dopamine degradation:
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581]
+
* [[PWY-7431]], aromatic biogenic amine degradation (bacteria):
−
** '''5''' reactions found over '''12''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5473]], hydroxycinnamic acid serotonin amides biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5473 PWY-5473]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5877]], beta-carboline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5877 PWY-5877]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6326]], camptothecin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6326 PWY-6326]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6307]], L-tryptophan degradation X (mammalian, via tryptamine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6307 PWY-6307]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7936]], psilocybin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7936 PWY-7936]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5290]], secologanin and strictosidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5290 PWY-5290]
 
−
** '''2''' reactions found over '''16''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR94831
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30340 30340]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00685 R00685]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03300 R03300]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P27718 P27718]
 
−
** [http://www.uniprot.org/uniprot/P05031 P05031]
 
−
** [http://www.uniprot.org/uniprot/P20711 P20711]
 
−
** [http://www.uniprot.org/uniprot/P17770 P17770]
 
−
** [http://www.uniprot.org/uniprot/P14173 P14173]
 
−
** [http://www.uniprot.org/uniprot/P22781 P22781]
 
−
** [http://www.uniprot.org/uniprot/P54770 P54770]
 
−
** [http://www.uniprot.org/uniprot/O82414 O82414]
 
−
** [http://www.uniprot.org/uniprot/P54771 P54771]
 
−
** [http://www.uniprot.org/uniprot/P34751 P34751]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=tryptophan decarboxylase}}
+
{{#set: common-name=3,4-dihydroxyphenylacetaldehyde dehydrogenase|aldehyde dehydrogenase (nad)}}
−
{{#set: ec-number=ec-4.1.1.q}}
+
{{#set: ec-number=ec-1.2.1.3}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=12}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN6666-5

  • direction:
    • left-to-right
  • common-name:
    • aldehyde dehydrogenase (nad)
    • 3,4-dihydroxyphenylacetaldehyde dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY6666-2, dopamine degradation:
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7431, aromatic biogenic amine degradation (bacteria):
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR94831
  • LIGAND-RXN:





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