Difference between revisions of "RXN6666-5"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-2-ENOYL-COA-REDUCTASE-NAD+-RXN-CPD-10280/NAD//CPD-14282/NADH/PROTON.37. TRANS-2-ENOYL-COA-RED...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN] == * direction: **...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN] == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
+ | * common-name: | ||
+ | ** tryptophan decarboxylase | ||
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/4.1.1.q ec-4.1.1.q] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 | + | * 1 [[PROTON]][c] '''+''' 1 [[TRP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[TRYPTAMINE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
+ | * Gene: [[SJ11952]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-3181]], L-tryptophan degradation VI (via tryptamine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3181 PWY-3181] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581] | ||
+ | ** '''5''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-5473]], hydroxycinnamic acid serotonin amides biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5473 PWY-5473] | ||
+ | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-5877]], beta-carboline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5877 PWY-5877] | ||
+ | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-6326]], camptothecin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6326 PWY-6326] | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6307]], L-tryptophan degradation X (mammalian, via tryptamine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6307 PWY-6307] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-7936]], psilocybin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7936 PWY-7936] | ||
+ | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-5290]], secologanin and strictosidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5290 PWY-5290] | ||
+ | ** '''2''' reactions found over '''16''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30340 30340] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00685 R00685] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P27718 P27718] | ||
+ | ** [http://www.uniprot.org/uniprot/P05031 P05031] | ||
+ | ** [http://www.uniprot.org/uniprot/P20711 P20711] | ||
+ | ** [http://www.uniprot.org/uniprot/P17770 P17770] | ||
+ | ** [http://www.uniprot.org/uniprot/P14173 P14173] | ||
+ | ** [http://www.uniprot.org/uniprot/P22781 P22781] | ||
+ | ** [http://www.uniprot.org/uniprot/P54770 P54770] | ||
+ | ** [http://www.uniprot.org/uniprot/O82414 O82414] | ||
+ | ** [http://www.uniprot.org/uniprot/P54771 P54771] | ||
+ | ** [http://www.uniprot.org/uniprot/P34751 P34751] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: nb gene associated= | + | {{#set: common-name=tryptophan decarboxylase}} |
− | {{#set: nb pathway associated= | + | {{#set: ec-number=ec-4.1.1.q}} |
− | {{#set: reconstruction category= | + | {{#set: nb gene associated=1}} |
− | {{#set: reconstruction tool= | + | {{#set: nb pathway associated=8}} |
− | {{#set: reconstruction comment= | + | {{#set: reconstruction category=annotation}} |
− | {{#set: reconstruction source= | + | {{#set: reconstruction tool=pathwaytools}} |
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=saccharina_japonica_genome}} |
Revision as of 14:26, 26 August 2019
Contents
Reaction AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN
- direction:
- left-to-right
- common-name:
- tryptophan decarboxylase
- ec-number:
Reaction formula
- 1 PROTON[c] + 1 TRP[c] => 1 CARBON-DIOXIDE[c] + 1 TRYPTAMINE[c]
Gene(s) associated with this reaction
- Gene: SJ11952
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-3181, L-tryptophan degradation VI (via tryptamine): PWY-3181
- 2 reactions found over 3 reactions in the full pathway
- PWY-581, indole-3-acetate biosynthesis II: PWY-581
- 5 reactions found over 12 reactions in the full pathway
- PWY-5473, hydroxycinnamic acid serotonin amides biosynthesis: PWY-5473
- 1 reactions found over 6 reactions in the full pathway
- PWY-5877, beta-carboline biosynthesis: PWY-5877
- 1 reactions found over 6 reactions in the full pathway
- PWY-6326, camptothecin biosynthesis: PWY-6326
- 2 reactions found over 5 reactions in the full pathway
- PWY-6307, L-tryptophan degradation X (mammalian, via tryptamine): PWY-6307
- 4 reactions found over 4 reactions in the full pathway
- PWY-7936, psilocybin biosynthesis: PWY-7936
- 1 reactions found over 6 reactions in the full pathway
- PWY-5290, secologanin and strictosidine biosynthesis: PWY-5290
- 2 reactions found over 16 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: