Difference between revisions of "RXN8J2-139"

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(Created page with "Category:reaction == Reaction RXN-9516 == * direction: ** left-to-right * common-name: ** 3-oxo-hexanoyl-[acyl-carrier protein] synthase ** 3-oxoacyl-[acyl-carrier-protein...")
(Created page with "Category:reaction == Reaction RXN8J2-139 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/3.9.1.2 ec-3.9.1.2] == Reaction formula == * 1 Protei...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-9516 ==
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== Reaction RXN8J2-139 ==
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
−
* common-name:
 
−
** 3-oxo-hexanoyl-[acyl-carrier protein] synthase
 
−
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179]
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** [http://enzyme.expasy.org/EC/3.9.1.2 ec-3.9.1.2]
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** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Butanoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-hexanoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[Protein-Arginine-Phosphates]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[Pi]][c] '''+''' 1 [[Protein-L-Arginines]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[SJ13023]]
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* Gene: [[SJ00005]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ15984]]
 
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** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ18059]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ06617]]
 
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ15983]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10624]]
 
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ04443]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plant cytoplasm):
 
−
** '''31''' reactions found over '''31''' reactions in the full pathway
 
−
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast):
 
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** '''7''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
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* LIGAND-RXN:
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{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] synthase|3-oxo-hexanoyl-[acyl-carrier protein] synthase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R11095 R11095]
−
{{#set: ec-number=ec-2.3.1.41|ec-2.3.1.179}}
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* METANETX-RXN : MNXR114396
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{{#set: nb gene associated=7}}
+
{{#set: direction=reversible}}
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{{#set: nb pathway associated=2}}
+
{{#set: ec-number=ec-3.9.1.2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: nb pathway associated=0}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN8J2-139

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR114396





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