Difference between revisions of "RXNN-404"
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(Created page with "Category:reaction == Reaction RXN1G-469 == * direction: ** left-to-right * common-name: ** 3-oxobehenoyl-[acyl-carrier protein] reductase ** 3-oxoacyl-[acyl-carrier-protei...") |
(Created page with "Category:reaction == Reaction HEPARITIN-SULFOTRANSFERASE-RXN == * direction: ** left-to-right * common-name: ** [heparan sulfate]-glucosamine n-sulfotransferase * ec-numbe...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction HEPARITIN-SULFOTRANSFERASE-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** [heparan sulfate]-glucosamine n-sulfotransferase |
| − | |||
| − | |||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.8.2.8 ec-2.8.2.8] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[HEPARIN-GLUCOSAMINE]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[Heparan-sulfate-D-GlcNS]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ04970]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[ | + | * [[PWY-6558]], heparan sulfate biosynthesis (late stages): |
| − | ** ''' | + | ** '''7''' reactions found over '''13''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | |||
== External links == | == External links == | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R02122 R02122] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=[heparan sulfate]-glucosamine n-sulfotransferase}} |
| − | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-2.8.2.8}} |
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=1}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
| − | {{#set: reconstruction category=annotation | + | {{#set: reconstruction category=annotation}} |
| − | {{#set: reconstruction tool=pathwaytools | + | {{#set: reconstruction tool=pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome | + | {{#set: reconstruction source=saccharina_japonica_genome}} |
Revision as of 15:32, 5 January 2021
Contents
Reaction HEPARITIN-SULFOTRANSFERASE-RXN
- direction:
- left-to-right
- common-name:
- [heparan sulfate]-glucosamine n-sulfotransferase
- ec-number:
Reaction formula
- 1 HEPARIN-GLUCOSAMINE[c] + 1 PAPS[c] => 1 3-5-ADP[c] + 1 Heparan-sulfate-D-GlcNS[c]
Gene(s) associated with this reaction
- Gene: SJ04970
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6558, heparan sulfate biosynthesis (late stages):
- 7 reactions found over 13 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- LIGAND-RXN:
Property "Common-name" (as page type) with input value "heparan sulfate]-glucosamine n-sulfotransferase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
