Difference between revisions of "Relaxed-DNAs"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERDEHYDROG-RXN HOMOSERDEHYDROG-RXN] == * direction: ** left-to-right * common-name: ** homoser...")
(Created page with "Category:metabolite == Metabolite Relaxed-DNAs == * common-name: ** a relaxed dna == Reaction(s) known to consume the compound == * 5.99.1.2-RXN == Reaction(s) known t...")
 
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[[Category:reaction]]
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[[Category:metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERDEHYDROG-RXN HOMOSERDEHYDROG-RXN] ==
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== Metabolite Relaxed-DNAs ==
* direction:
 
** left-to-right
 
 
* common-name:
 
* common-name:
** homoserine dehydrogenase
+
** a relaxed dna
* ec-number:
+
== Reaction(s) known to consume the compound ==
** [http://enzyme.expasy.org/EC/1.1.1.3 ec-1.1.1.3]
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* [[5.99.1.2-RXN]]
== Reaction formula ==
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== Reaction(s) known to produce the compound ==
* 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[HOMO-SER]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
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* [[5.99.1.2-RXN]]
== Gene(s) associated with this reaction  ==
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== Reaction(s) of unknown directionality ==
* Gene: [[SJ20686]]
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{{#set: common-name=a relaxed dna}}
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ16019]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ22223]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s) ==
 
* [[HOMOSERSYN-PWY]], L-homoserine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERSYN-PWY HOMOSERSYN-PWY]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15759 15759]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01773 R01773]
 
** [http://www.genome.jp/dbget-bin/www_bget?R01775 R01775]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P44505 P44505]
 
** [http://www.uniprot.org/uniprot/Q58997 Q58997]
 
** [http://www.uniprot.org/uniprot/P27725 P27725]
 
** [http://www.uniprot.org/uniprot/O67677 O67677]
 
** [http://www.uniprot.org/uniprot/P19582 P19582]
 
** [http://www.uniprot.org/uniprot/P00561 P00561]
 
** [http://www.uniprot.org/uniprot/P00562 P00562]
 
** [http://www.uniprot.org/uniprot/P08499 P08499]
 
** [http://www.uniprot.org/uniprot/Q9JR84 Q9JR84]
 
** [http://www.uniprot.org/uniprot/Q9PIX8 Q9PIX8]
 
** [http://www.uniprot.org/uniprot/P56429 P56429]
 
** [http://www.uniprot.org/uniprot/O27300 O27300]
 
** [http://www.uniprot.org/uniprot/Q9CGD8 Q9CGD8]
 
** [http://www.uniprot.org/uniprot/P52985 P52985]
 
** [http://www.uniprot.org/uniprot/P31116 P31116]
 
** [http://www.uniprot.org/uniprot/P37142 P37142]
 
** [http://www.uniprot.org/uniprot/Q9SA18 Q9SA18]
 
** [http://www.uniprot.org/uniprot/P52986 P52986]
 
** [http://www.uniprot.org/uniprot/P49079 P49079]
 
** [http://www.uniprot.org/uniprot/P49080 P49080]
 
** [http://www.uniprot.org/uniprot/P93402 P93402]
 
** [http://www.uniprot.org/uniprot/O81852 O81852]
 
** [http://www.uniprot.org/uniprot/O63067 O63067]
 
** [http://www.uniprot.org/uniprot/O65027 O65027]
 
** [http://www.uniprot.org/uniprot/P46806 P46806]
 
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=homoserine dehydrogenase}}
 
{{#set: ec-number=ec-1.1.1.3}}
 
{{#set: nb gene associated=3}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Latest revision as of 11:16, 18 March 2021

Metabolite Relaxed-DNAs

  • common-name:
    • a relaxed dna

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality