Difference between revisions of "Rhodopsins"

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(Created page with "Category:gene == Gene SJ04638 == * transcription-direction: ** positive * right-end-position: ** 32303 * left-end-position: ** 27800 * centisome-position: ** 26.925722...")
 
(Created page with "Category:gene == Gene SJ01328 == * transcription-direction: ** negative * right-end-position: ** 149838 * left-end-position: ** 149359 * centisome-position: ** 97.80116...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ04638 ==
+
== Gene SJ01328 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 32303
+
** 149838
 
* left-end-position:
 
* left-end-position:
** 27800
+
** 149359
 
* centisome-position:
 
* centisome-position:
** 26.925722    
+
** 97.80116    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[TRIMETHYLLYSINE-DIOXYGENASE-RXN]]
+
* [[3.1.26.4-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
== Pathway(s) associated ==
+
* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
* [[PWY-6100]]
+
** Category: [[annotation]]
** '''3''' reactions found over '''4''' reactions in the full pathway
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: transcription-direction=positive}}
+
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
{{#set: right-end-position=32303}}
+
** Category: [[annotation]]
{{#set: left-end-position=27800}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: centisome-position=26.925722   }}
+
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=149838}}
 +
{{#set: left-end-position=149359}}
 +
{{#set: centisome-position=97.80116   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=3}}
{{#set: nb pathway associated=1}}
 

Revision as of 14:23, 26 August 2019

Gene SJ01328

  • transcription-direction:
    • negative
  • right-end-position:
    • 149838
  • left-end-position:
    • 149359
  • centisome-position:
    • 97.80116

Organism(s) associated with this gene

Reaction(s) associated