Difference between revisions of "S-palmitoyl-L-cysteine-in-proteins"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17877 RXN-17877] == * direction: ** left-to-right * common-name: ** methionine aminopeptidase *...")
(Created page with "Category:gene == Gene SJ03681 == * transcription-direction: ** positive * right-end-position: ** 76441 * left-end-position: ** 49535 * centisome-position: ** 41.899986...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17877 RXN-17877] ==
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== Gene SJ03681 ==
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* direction:
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* transcription-direction:
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** left-to-right
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** positive
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* common-name:
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* right-end-position:
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** methionine aminopeptidase
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** 76441
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* ec-number:
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* left-end-position:
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** [http://enzyme.expasy.org/EC/3.4.11.18 ec-3.4.11.18]
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** 49535
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== Reaction formula ==
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* centisome-position:
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* 1 [[L-methionyl-L-threonyl-Protein]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[Protein-N-terminal-L-threonine]][c]
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** 41.899986   
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
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* Gene: [[SJ02903]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) associated ==
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* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[SJ16573]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[SJ16932]]
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* [[RXN-11135]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[SJ18138]]
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* [[RXN-12195]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[SJ16939]]
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* [[RXN-12196]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[SJ01604]]
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* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) ==
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== Pathway(s) associated ==
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* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
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* [[PWY-7210]]
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** '''6''' reactions found over '''21''' reactions in the full pathway
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[PWY-7198]]
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** '''6''' reactions found over '''7''' reactions in the full pathway
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== External links  ==
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* [[PWY-7184]]
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{{#set: direction=left-to-right}}
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: common-name=methionine aminopeptidase}}
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* [[PWY-6545]]
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{{#set: ec-number=ec-3.4.11.18}}
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** '''8''' reactions found over '''9''' reactions in the full pathway
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{{#set: nb gene associated=6}}
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{{#set: transcription-direction=positive}}
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{{#set: nb pathway associated=1}}
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{{#set: right-end-position=76441}}
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{{#set: reconstruction category=annotation}}
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{{#set: left-end-position=49535}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: centisome-position=41.899986    }}
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{{#set: reconstruction comment=n.a}}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: reconstruction source=saccharina_japonica_genome}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=4}}

Revision as of 09:28, 27 August 2019

Gene SJ03681

  • transcription-direction:
    • positive
  • right-end-position:
    • 76441
  • left-end-position:
    • 49535
  • centisome-position:
    • 41.899986

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




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