Difference between revisions of "SAICARSYN-RXN"

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(Created page with "Category:reaction == Reaction GLUTAMATESYN-RXN == * direction: ** left-to-right * common-name: ** l-glutamate:nadp+ oxidoreductase (transaminating) * ec-number: ** [http:/...")
(Created page with "Category:reaction == Reaction SAICARSYN-RXN == * direction: ** left-to-right * common-name: ** phosphoribosylaminoimidazole-succinocarboxamide synthase * ec-number: ** [ht...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTAMATESYN-RXN ==
+
== Reaction SAICARSYN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** l-glutamate:nadp+ oxidoreductase (transaminating)
+
** phosphoribosylaminoimidazole-succinocarboxamide synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.4.1.13 ec-1.4.1.13]
+
** [http://enzyme.expasy.org/EC/6.3.2.6 ec-6.3.2.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 2 [[GLT]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''+''' 1 [[PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20190]]
+
* Gene: [[SJ13173]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ10812]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10813]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ04922]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLUTSYN-PWY]], L-glutamate biosynthesis I:
+
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II:
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[GLUTAMINEFUM-PWY]], L-glutamine degradation II:
+
* [[PWY-6123]], inosine-5'-phosphate biosynthesis I:
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7234]], inosine-5'-phosphate biosynthesis III:
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR108987
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15503 15503]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22628 22628]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00114 R00114]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04591 R04591]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q05756 Q05756]
+
** [http://www.uniprot.org/uniprot/Q07296 Q07296]
−
** [http://www.uniprot.org/uniprot/Q05755 Q05755]
+
** [http://www.uniprot.org/uniprot/Q9PHZ9 Q9PHZ9]
−
** [http://www.uniprot.org/uniprot/Q9PJA4 Q9PJA4]
+
** [http://www.uniprot.org/uniprot/P0A7D7 P0A7D7]
−
** [http://www.uniprot.org/uniprot/Q9PJA2 Q9PJA2]
+
** [http://www.uniprot.org/uniprot/P12046 P12046]
−
** [http://www.uniprot.org/uniprot/Q9CG25 Q9CG25]
+
** [http://www.uniprot.org/uniprot/Q58987 Q58987]
−
** [http://www.uniprot.org/uniprot/Q58746 Q58746]
+
** [http://www.uniprot.org/uniprot/Q9JV73 Q9JV73]
−
** [http://www.uniprot.org/uniprot/P09831 P09831]
+
** [http://www.uniprot.org/uniprot/P50124 P50124]
−
** [http://www.uniprot.org/uniprot/Q9CG24 Q9CG24]
+
** [http://www.uniprot.org/uniprot/P27602 P27602]
−
** [http://www.uniprot.org/uniprot/P09832 P09832]
+
** [http://www.uniprot.org/uniprot/P27616 P27616]
−
** [http://www.uniprot.org/uniprot/P39812 P39812]
+
** [http://www.uniprot.org/uniprot/P22234 P22234]
−
** [http://www.uniprot.org/uniprot/Q9S2Y9 Q9S2Y9]
+
** [http://www.uniprot.org/uniprot/P73471 P73471]
 +
** [http://www.uniprot.org/uniprot/Q9R7D5 Q9R7D5]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=l-glutamate:nadp+ oxidoreductase (transaminating)}}
+
{{#set: common-name=phosphoribosylaminoimidazole-succinocarboxamide synthase}}
−
{{#set: ec-number=ec-1.4.1.13}}
+
{{#set: ec-number=ec-6.3.2.6}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction SAICARSYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • phosphoribosylaminoimidazole-succinocarboxamide synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6124, inosine-5'-phosphate biosynthesis II:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6123, inosine-5'-phosphate biosynthesis I:
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-7234, inosine-5'-phosphate biosynthesis III:
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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