Difference between revisions of "SAICARSYN-RXN"
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(Created page with "Category:reaction == Reaction RXN-12560 == * direction: ** left-to-right * common-name: ** acetoacetyl-coa reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.36...") |
(Created page with "Category:reaction == Reaction SAICARSYN-RXN == * direction: ** left-to-right * common-name: ** phosphoribosylaminoimidazole-succinocarboxamide synthase * ec-number: ** [ht...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction SAICARSYN-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** phosphoribosylaminoimidazole-succinocarboxamide synthase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/6.3.2.6 ec-6.3.2.6] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''+''' 1 [[PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ13173]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | + | ** Category: [[orthology]] | |
− | ** Category: [[ | + | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | *** Source: [[ | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-6124]], inosine-5'-phosphate biosynthesis II: |
− | ** ''' | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
+ | * [[PWY-6123]], inosine-5'-phosphate biosynthesis I: | ||
+ | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-7234]], inosine-5'-phosphate biosynthesis III: | ||
+ | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | * METANETX-RXN : | + | * METANETX-RXN : MNXR108987 |
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22628 22628] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R04591 R04591] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q07296 Q07296] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PHZ9 Q9PHZ9] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A7D7 P0A7D7] | ||
+ | ** [http://www.uniprot.org/uniprot/P12046 P12046] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58987 Q58987] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JV73 Q9JV73] | ||
+ | ** [http://www.uniprot.org/uniprot/P50124 P50124] | ||
+ | ** [http://www.uniprot.org/uniprot/P27602 P27602] | ||
+ | ** [http://www.uniprot.org/uniprot/P27616 P27616] | ||
+ | ** [http://www.uniprot.org/uniprot/P22234 P22234] | ||
+ | ** [http://www.uniprot.org/uniprot/P73471 P73471] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9R7D5 Q9R7D5] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=phosphoribosylaminoimidazole-succinocarboxamide synthase}} |
− | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-6.3.2.6}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=1}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}} |
Latest revision as of 11:24, 18 March 2021
Contents
Reaction SAICARSYN-RXN
- direction:
- left-to-right
- common-name:
- phosphoribosylaminoimidazole-succinocarboxamide synthase
- ec-number:
Reaction formula
- 1 ATP[c] + 1 L-ASPARTATE[c] + 1 PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE[c] => 1 ADP[c] + 1 P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE[c] + 1 PROTON[c] + 1 Pi[c]
Gene(s) associated with this reaction
- Gene: SJ13173
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6124, inosine-5'-phosphate biosynthesis II:
- 5 reactions found over 5 reactions in the full pathway
- PWY-6123, inosine-5'-phosphate biosynthesis I:
- 4 reactions found over 6 reactions in the full pathway
- PWY-7234, inosine-5'-phosphate biosynthesis III:
- 3 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
External links
- METANETX-RXN : MNXR108987
- RHEA:
- LIGAND-RXN:
- UNIPROT: