Difference between revisions of "SAMDECARB-RXN"
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(Created page with "Category:reaction == Reaction ECOAH4h == * direction: ** reversible * common-name: ** enoyl-coa hydratase (c10:0) == Reaction formula == * 1.0 CPD0-2244[h] '''<=>''' 1...") |
(Created page with "Category:reaction == Reaction ACETYLORNTRANSAM-RXN == * direction: ** reversible * common-name: ** n-acetylornithine aminotransferase * ec-number: ** [http://enzyme.expasy...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction ACETYLORNTRANSAM-RXN == |
* direction: | * direction: | ||
** reversible | ** reversible | ||
* common-name: | * common-name: | ||
| − | ** | + | ** n-acetylornithine aminotransferase |
| + | * ec-number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.6.1.11 ec-2.6.1.11] | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 | + | * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[N-ALPHA-ACETYLORNITHINE]][c] '''<=>''' 1 [[CPD-469]][c] '''+''' 1 [[GLT]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ07216]] |
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[GLUTORN-PWY]], L-ornithine biosynthesis I: | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): | ||
| + | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): | ||
| + | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18052 18052] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R02283 R02283] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/P18335 P18335] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9PIR7 Q9PIR7] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9JTX9 Q9JTX9] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9CHD3 Q9CHD3] | ||
| + | ** [http://www.uniprot.org/uniprot/P30900 P30900] | ||
| + | ** [http://www.uniprot.org/uniprot/P18544 P18544] | ||
| + | ** [http://www.uniprot.org/uniprot/O74548 O74548] | ||
| + | ** [http://www.uniprot.org/uniprot/O14433 O14433] | ||
{{#set: direction=reversible}} | {{#set: direction=reversible}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=n-acetylornithine aminotransferase}} |
| + | {{#set: ec-number=ec-2.6.1.11}} | ||
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: reconstruction category=annotation|orthology}} |
| − | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 15:34, 5 January 2021
Contents
Reaction ACETYLORNTRANSAM-RXN
- direction:
- reversible
- common-name:
- n-acetylornithine aminotransferase
- ec-number:
Reaction formula
- 1 2-KETOGLUTARATE[c] + 1 N-ALPHA-ACETYLORNITHINE[c] <=> 1 CPD-469[c] + 1 GLT[c]
Gene(s) associated with this reaction
- Gene: SJ07216
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- GLUTORN-PWY, L-ornithine biosynthesis I:
- 5 reactions found over 5 reactions in the full pathway
- ARGSYNBSUB-PWY, L-arginine biosynthesis II (acetyl cycle):
- 9 reactions found over 9 reactions in the full pathway
- PWY-5154, L-arginine biosynthesis III (via N-acetyl-L-citrulline):
- 8 reactions found over 9 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
