Difference between revisions of "SECOLOGANIN-CPD"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PALMITOYL-COA-HYDROLASE-RXN PALMITOYL-COA-HYDROLASE-RXN] == * direction: ** left-to-right * common-...")
 
(Created page with "Category:metabolite == Metabolite SECOLOGANIN-CPD == * common-name: ** secologanin * smiles: ** c=c[ch]1(c(oc=c(c(=o)oc)[ch](cc=o)1)oc2(oc(co)c(o)c(o)c(o)2)) * inchi-key:...")
 
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PALMITOYL-COA-HYDROLASE-RXN PALMITOYL-COA-HYDROLASE-RXN] ==
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== Metabolite SECOLOGANIN-CPD ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** palmitoyl-coa hydrolase
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** secologanin
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/3.1.2.2 ec-3.1.2.2]
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** c=c[ch]1(c(oc=c(c(=o)oc)[ch](cc=o)1)oc2(oc(co)c(o)c(o)c(o)2))
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== Reaction formula ==
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* inchi-key:
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* 1 [[PALMITYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c]
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** cskkdsfetglmsb-nrzpkykesa-n
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ18316]]
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** 388.371
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** Category: [[orthology]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[STRICTOSIDINE-SYNTHASE-RXN]]
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* Gene: [[SJ09703]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: common-name=secologanin}}
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== Pathway(s) ==
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{{#set: inchi-key=inchikey=cskkdsfetglmsb-nrzpkykesa-n}}
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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{{#set: molecular-weight=388.371}}
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** '''31''' reactions found over '''31''' reactions in the full pathway
 
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* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
 
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** '''9''' reactions found over '''19''' reactions in the full pathway
 
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* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
 
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** '''8''' reactions found over '''18''' reactions in the full pathway
 
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* [[PWY-321]], cutin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-321 PWY-321]
 
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** '''3''' reactions found over '''16''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16645 16645]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01274 R01274]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q64559 Q64559]
 
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** [http://www.uniprot.org/uniprot/O14734 O14734]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=palmitoyl-coa hydrolase}}
 
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{{#set: ec-number=ec-3.1.2.2}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=4}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pathwaytools|pantograph}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
 

Latest revision as of 11:17, 18 March 2021

Metabolite SECOLOGANIN-CPD

  • common-name:
    • secologanin
  • smiles:
    • c=c[ch]1(c(oc=c(c(=o)oc)[ch](cc=o)1)oc2(oc(co)c(o)c(o)c(o)2))
  • inchi-key:
    • cskkdsfetglmsb-nrzpkykesa-n
  • molecular-weight:
    • 388.371

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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