Difference between revisions of "SEDOBISALDOL-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYTOCHROME-B5-REDUCTASE-RXN CYTOCHROME-B5-REDUCTASE-RXN] == * direction: ** left-to-right * common-...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16631 RXN-16631] == * direction: ** left-to-right * common-name: ** (3r,11z)-3-hydroxy-icos-11-...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYTOCHROME-B5-REDUCTASE-RXN CYTOCHROME-B5-REDUCTASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16631 RXN-16631] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** nadh-dependent cytochrome b5 reductase
+
** (3r,11z)-3-hydroxy-icos-11-enoyl-[acp] dehydratase
−
** cytochrome-b5 reductase activity, acting on nad(p)h
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.6.2.2 ec-1.6.2.2]
+
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[FERRICYTOCHROME-B5]][c] '''+''' 1 [[NADH]][c] '''=>''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[3R-11Z-3-hydroxy-icos-11-enoyl-ACPs]][c] '''=>''' 1 [[2E-11Z-icosa-2-11-dienoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ10275]]
−
* Gene: [[SJ06442]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ19008]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ02358]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ13718]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ09265]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7663]], gondoate biosynthesis (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7663 PWY-7663]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=46681 46681]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00100 R00100]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P07514 P07514]
 
−
** [http://www.uniprot.org/uniprot/P00387 P00387]
 
−
** [http://www.uniprot.org/uniprot/P20070 P20070]
 
−
** [http://www.uniprot.org/uniprot/P36060 P36060]
 
−
** [http://www.uniprot.org/uniprot/P38626 P38626]
 
−
** [http://www.uniprot.org/uniprot/O13809 O13809]
 
−
** [http://www.uniprot.org/uniprot/Q9ZNT1 Q9ZNT1]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nadh-dependent cytochrome b5 reductase|cytochrome-b5 reductase activity, acting on nad(p)h}}
+
{{#set: common-name=(3r,11z)-3-hydroxy-icos-11-enoyl-[acp] dehydratase}}
−
{{#set: ec-number=ec-1.6.2.2}}
+
{{#set: ec-number=ec-4.2.1.59}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:31, 27 August 2019

Reaction RXN-16631

  • direction:
    • left-to-right
  • common-name:
    • (3r,11z)-3-hydroxy-icos-11-enoyl-[acp] dehydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7663, gondoate biosynthesis (anaerobic): PWY-7663
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "(3r,11z)-3-hydroxy-icos-11-enoyl-[acp] dehydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SEDOBISALDOL-RXN&oldid=36798"